G254019


Basic Information

Item Value
gene id G254019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38214305 ~ 38214589 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU289455
caaaaaagaagcttgaggagacgggtgatgcggagtgccgaatgtacccctgtcccagcaaTTCAGCAACATATGTCTCCTTAGCtactgtctcctcctgggacaatgggtacacgtggCTCCTAGGAAGTGCAGCATTCTCCAGGAGGTCTATCGCGCAGTCCCCTcgacgatggggtggtaattgggtcgccttctttttactgaaggcgatagccaaatcggcatattcagagggaatacgcacagtggaaacctggtctggactctccaccgtagttgCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU289455 True 285 lncRNA 0.53 1 38214305 38214589

Neighbor

gene id symbol gene type direction distance location
LOC110519942 LOC106586050 coding upstream 458853 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 522407 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 724735 37428004 ~ 37489579 (+)
LOC110519936 LOC106586041 coding upstream 789969 37419106 ~ 37424336 (+)
LOC110519932 LOC106591969 coding upstream 1554752 36657467 ~ 36659553 (+)
LOC110519944 LOC106586047 coding downstream 19754 38234343 ~ 38250022 (+)
LOC110519946 NA coding downstream 421357 38635946 ~ 38760490 (+)
LOC110519950 LOC106586053 coding downstream 957308 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 1179052 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 1393580 39608169 ~ 39621078 (+)
G254011 NA non-coding upstream 6304 38207788 ~ 38208001 (+)
G254003 NA non-coding upstream 12347 38201750 ~ 38201958 (+)
G254000 NA non-coding upstream 14448 38199531 ~ 38199857 (+)
G253999 NA non-coding upstream 14935 38199163 ~ 38199370 (+)
G253995 NA non-coding upstream 17113 38192156 ~ 38197192 (+)
G254039 NA non-coding downstream 18238 38232827 ~ 38233048 (+)
G254062 NA non-coding downstream 49229 38263818 ~ 38269789 (+)
G254124 NA non-coding downstream 124015 38338604 ~ 38338854 (+)
G254125 NA non-coding downstream 125446 38340035 ~ 38340248 (+)
G254127 NA non-coding downstream 126770 38341359 ~ 38343849 (+)
G253834 LOC100136012 other upstream 121571 38092322 ~ 38092734 (+)
G253299 NA other upstream 486967 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 1586763 36623610 ~ 36627542 (+)
G251773 NA other upstream 1689132 36511574 ~ 36579307 (+)
LOC110519579 gmeb1 other upstream 2992933 35203647 ~ 35221874 (+)
G254204 NA other downstream 226577 38441166 ~ 38441734 (+)
G254445 NA other downstream 385898 38600487 ~ 38600866 (+)
G254816 NA other downstream 628921 38843510 ~ 38844556 (+)
LOC110519960 LOC106586058 other downstream 1444470 39658753 ~ 39668297 (+)
LOC110519969 LOC106586020 other downstream 2225480 40440040 ~ 40452542 (+)

Expression


Co-expression Network