G254758


Basic Information

Item Value
gene id G254758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 38780122 ~ 38780346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU290251
ccaaaaatataaacgtaattAAAAAGTAAAGTGTGGATGGAAGCAATTCCCTtcttcacagaagagtggaggctgtagcACAGTTTAGAAAgaaaattacagactcctctactttccggctacccagatagagcactaaataaacttcagttagtgctaaatacggctgctagaatcctgactagaaccaaaaaattggatcatattagtccagtgctagcctcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU290251 True 225 lncRNA 0.39 1 38780122 38780346

Neighbor

gene id symbol gene type direction distance location
LOC110519946 NA coding upstream 19632 38635946 ~ 38760490 (+)
LOC110519944 LOC106586047 coding upstream 530100 38234343 ~ 38250022 (+)
LOC110519942 LOC106586050 coding upstream 1024670 37748695 ~ 37756709 (+)
si:ch211-184m13.4 LOC106586045 coding upstream 1088224 37688788 ~ 37691898 (+)
LOC110519939 LOC106604981 coding upstream 1290552 37428004 ~ 37489579 (+)
LOC110519950 LOC106586053 coding downstream 391551 39171897 ~ 39214104 (+)
trnaf-gaa NA coding downstream 613295 39393641 ~ 39393713 (+)
LOC110519956 LOC105026395 coding downstream 827823 39608169 ~ 39621078 (+)
LOC110519960 LOC106586058 coding downstream 878407 39658753 ~ 39668297 (+)
LOC110519963 LOC106586016 coding downstream 926095 39706441 ~ 39709665 (+)
G254751 NA non-coding upstream 5182 38773534 ~ 38774940 (+)
G254743 NA non-coding upstream 10946 38768865 ~ 38769176 (+)
G254741 NA non-coding upstream 11660 38768257 ~ 38768462 (+)
G254736 NA non-coding upstream 14999 38764861 ~ 38765123 (+)
G254735 NA non-coding upstream 15465 38764337 ~ 38764657 (+)
G254769 NA non-coding downstream 13448 38793794 ~ 38793997 (+)
G254770 NA non-coding downstream 14443 38794789 ~ 38795057 (+)
G254814 NA non-coding downstream 81397 38861743 ~ 38862237 (+)
G254848 NA non-coding downstream 123400 38903746 ~ 38904270 (+)
G254926 NA non-coding downstream 198630 38978976 ~ 39057441 (+)
G254445 NA other upstream 179256 38600487 ~ 38600866 (+)
G254204 NA other upstream 338388 38441166 ~ 38441734 (+)
G253834 LOC100136012 other upstream 687388 38092322 ~ 38092734 (+)
G253299 NA other upstream 1052784 37726948 ~ 37727338 (+)
G251845 zdhhc18 other upstream 2152580 36623610 ~ 36627542 (+)
G254816 NA other downstream 63164 38843510 ~ 38844556 (+)
LOC110519969 LOC106586020 other downstream 1659723 40440040 ~ 40452542 (+)
G261749 NA other downstream 5471723 44252069 ~ 44252551 (+)
G262037 NA other downstream 5740073 44520419 ~ 44525408 (+)

Expression


Co-expression Network