XLOC_022148



Basic Information


Item Value
gene id XLOC_022148
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 7419810 ~ 7428593 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00044951
CAGTAGGACACTGAGCAGGACCACTGATAAAAGCAGcaggagggagggagagagacagagagagaatggAGAGAAAGGCCCAGCACAATGAGACACAGTCAGAGGAATCCCAGTGGGACTTCAGATGGACAGGCCTGCCGTCACTGATACACTCACAGTCACACTGACTGCGCTCTAATCTGCACACATTAAACTCCCCTCGCAGCGATAATAACTACAGCTCAGAGACCTCACTGCGCTTTCAATGACATCACTGAAACCTCGCTCTGTCCTCTTCCTTTTCTTTCGTCTGATAACAGCAGATGACCTATGGAGGAGTCttagccaatcaatcaatcaatttggagaatttaaataattcatcAACAGAACATTCATGTTTGTTCCAATAATATTGTATCTGAAGGCATGATCAAATTAGCTTAAAAACTGTTATGCTTCACAGAAAGTTAAATAATGGGTCCCgttatttaaagtatattttatccaaaaaaa

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00044951 True 495 lncRNA 0.42 2 7419810 7428593

Neighbor


gene id symbol gene type direction distance location
XLOC_022147 NA coding downstream 95931 7309563 ~ 7323879 (-)
XLOC_022144 NA coding downstream 202236 7170866 ~ 7217574 (-)
XLOC_022146 mir1-1 coding downstream 209548 7210157 ~ 7210262 (-)
XLOC_022145 NA coding downstream 216949 7200243 ~ 7202861 (-)
XLOC_022143 slco4a1 coding downstream 294316 7067196 ~ 7125494 (-)
XLOC_022149 CU633736.1 coding upstream 152593 7581186 ~ 7581302 (-)
XLOC_022150 plagl2 coding upstream 163416 7592009 ~ 7674902 (-)
XLOC_022151 NA coding upstream 304546 7733139 ~ 7735392 (-)
XLOC_022152 PCMTD2 coding upstream 314888 7743481 ~ 7755373 (-)
XLOC_022153 myt1b coding upstream 333440 7762033 ~ 7826849 (-)
XLOC_022141 NA non-coding downstream 422127 6984672 ~ 6997683 (-)
XLOC_022154 BX005278.1 non-coding upstream 483516 7912109 ~ 7912223 (-)
XLOC_022155 AL627126.1 non-coding upstream 521492 7950085 ~ 7971776 (-)
XLOC_022156 NA non-coding upstream 590182 8018775 ~ 8155055 (-)

Expression



Co-expression Network