XLOC_022307


Basic Information

Item Value
gene id XLOC_022307
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 20348459 ~ 20354924 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044990
TCTCGTTTTAATCATGCTTTGTCCTTAAATGGCACAGCAGTCATTGTTgcatttattccattcttttcGCTTCCTATTTcttactcacacacaaacacacactcatacacacacgcacactcgcACCAAGAAGGCATCACTGTGCTGCTGACAAGGATAAGCACATGGTCACTCCACAGACTGGCTGCCTGTTTTGGAACTCTTTGTTTTTCACTACATCAGCTCTACAAGTATTTTATGAGAGTTAGTGTTGCTGCACTTTACTGAAAGCTGCTAATCCAGTTTACTCTCTCAGATCCACTGTCACGCTGATTCTGGGAGGTCTCGTCTTTTCAGCACTGATGGTCCATGGATAAACTGCAGTGACACACTGCCGCGTCCTTCAGAGGGGCCCTCCAATTACCACTGAGACACACAGGCCACCAAAAACGTGAAAAAAATGTGCATGCTATGTCTGGAAATCTCCTAAAGAAGCAATCCATAAATCGAAATGAGTAAATAAGACTGGTCAGAGACTAGAAGAAGATTTTTTCCTCATTAGCAGATATGTTTAAACTGACCAAGACTGCCATTTCGATTTGTTTGaccttttaaattcatttaaagtggcagcacaaaaaaaaaaaaaaactcctccgCTATGCTTTTACCTTCTGTAGCGTGACTGATTTCCTCTGGTGTTCAGAGTGGACTGGGTTTTTCTAGCACCATTTGAAATCGGTCGTGCTGAAAGGTATGGCGTCGCCTTCATATGTGCAGGCAGCAGACCACTTTGTAGTCCCTGAAAAGACAGGAAATGGATGGGGTGATGTTTGAAGTTGTATATCAACAAACCACTGGTGCAGAGACAGAAATGTACCATTATTTATTGCCTCAGTTGAATTAAAGTAACCAGATCTTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044990 True 902 lncRNA 0.42 3 20348459 20354924

Neighbor

gene id symbol gene type direction distance location
XLOC_022306 si:rp71-17i16.6 coding downstream 2986 20340200 ~ 20345473 (-)
XLOC_022305 lamb2l coding downstream 9862 20261570 ~ 20338597 (-)
XLOC_022304 lamb2 coding downstream 89969 20180159 ~ 20258490 (-)
XLOC_022303 usp19 coding downstream 170932 20145300 ~ 20177527 (-)
XLOC_022302 si:dkey-32e6.3 coding downstream 205248 20137520 ~ 20143211 (-)
XLOC_022308 si:rp71-17i16.5 coding upstream 2323 20357247 ~ 20363261 (-)
XLOC_022309 CR749762.1 coding upstream 18390 20373314 ~ 20374396 (-)
XLOC_022310 NA coding upstream 64209 20419133 ~ 20421573 (-)
XLOC_022311 taf13 coding upstream 73915 20428839 ~ 20429741 (-)
XLOC_022312 NA coding upstream 162685 20517609 ~ 20518851 (-)
XLOC_022295 NA non-coding downstream 403037 19944173 ~ 19945422 (-)
XLOC_022294 CT574579.1 non-coding downstream 440515 19907828 ~ 19907944 (-)
XLOC_022292 NA non-coding downstream 516720 19822434 ~ 19831739 (-)
XLOC_022291 CR352234.4 non-coding downstream 635231 19713095 ~ 19713228 (-)
XLOC_022284 NA non-coding downstream 875840 19467540 ~ 19472619 (-)
XLOC_022314 NA non-coding upstream 474421 20829345 ~ 20836604 (-)
XLOC_022315 NA non-coding upstream 503389 20858313 ~ 20938578 (-)
XLOC_022316 NA non-coding upstream 649282 21004206 ~ 21007954 (-)

Expression


Co-expression Network