XLOC_022313 (znf362b)


Basic Information

Item Value
gene id XLOC_022313
gene name znf362b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 20738382 ~ 20764227 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044051
AGCCTGACCCGGAAGCTGTGCTGTCTGGAGGCACATAGAGAACATCCAGCCTCTTCTCTGCTTTATAAAAGACTCTTCTGCGAGGAAAAATACCCTGACATCGATATAACAGaaagATGGCGGAGCCTCGCTTTAATAATCCATATTTCTGGCCACCACCTCCCTCTATGCCTGGTCAATTGGATAACCTGGTTCTTATCGACAAAATCAAAGAGCAACTGATGGCAGAAAAGATAAGACCTCCGCATTTGCCGCCCACCACCGTCCCCTCTCAGCAGACCCTGCTGGTGGCCTCTCAACCGTCAGATGCTGGACAGCATGTCATGTCCATCCCCAAACTACAGCAGGTGCCCGGCCTTCAAGCCCACAATTCTTCTCAGCCTGACATCGCCCTGCACGCCCGTCCAGCATCCAGCACCATTGCAGAGCTGAGTATAGATGACAAGTCAACAGTGAAGGCAAAGGGATTGTGGGAAGACTGGCATATGCGTCAAGCAGTGGAGCAAGCTTCCAGAACGAACCATCGATCAGGTCTAACGCTGTCGTCCCGCACAGACAGCCACAACACCTCTGAGGCCATTACTCCCACTACTCCCACATCTAGCAGCCAGAACCGTTTAGGTGGAGCGGCTTCTTTAAACACCATATCTGGCCTGGCCAGCGGTCCCGGGATGGAGCACATCAAAAGCGGCGGTCTGGTGGGGATGCTGGGACCACAGCCCAAAGCTCCAAGGGGGCGCAAGAAGATTAAGGCGGAGCACAACACGGGCCCCTTACTGGTGGTGCCGTACCCACTTCTGGCCTCGGGCCCTGACCAGGCAGTCACCATTGCCAAAGAGGGAAAAACCTACAGGTGTAAAGTGTGTCCACGCACTTGCTTCAACAAGTCTGAGATGCAGATTCATTCCAAGTCCCACACGGAGGCCAAACCTCACAAGTGCCCTCACTGTTCGAAGTCCTTCGCCAACGCCTCCTATCTAGCACAGCACTTACGCATTCACTTAGGCATTAAGCCCTACCACTGCTCCTACTGTGAGAACTCTTTCCGGCAGTTATCACACCTCCAGCAGCACACCAGgATTCACACTGGGGACAGACCATATAAATGCGCCCAACCTGGATGTGAAAAAGCATTCACACAACTCTCAAACCTACAGTCTCACCAGAGACAACATAACAAAGACAAGCCATACAAATGTCCGAACTGCTACAGAGCTTACACAGACTCTGCCTCGCTACAGATCCATCTCTCCGCACACGCCATCAAGAACGCTAAATCATACTGCTGCAGTATGTGTGGTCGCGCATACACCTCAGAGACCTACCTAATGAAGCACATGTCCAAGCACACTGTGGTGGAGCATCTCGTCAGCCACCATTCACCACAGAGAACTGAATCTCCCAGCATCCCCATCCGCATCTCACTCATCTGAGCTTCCTCCCCCCGTGTTTCGCTTCCATTCAAAGGTATTTTGTTCACTGCGATGGTcttccgtaaaaaaaaaaaaaaagaaacaaaa

Function

symbol description
znf362b Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF362 (zinc finger protein 362).

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070424-35 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF362 (zinc finger protein 362).

Ensembl:

ensembl_id ENSDARG00000062231

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044051 True 1520 mRNA 0.52 9 20738382 20764227

Neighbor

gene id symbol gene type direction distance location
XLOC_022312 NA coding downstream 219531 20517609 ~ 20518851 (-)
XLOC_022311 taf13 coding downstream 308641 20428839 ~ 20429741 (-)
XLOC_022310 NA coding downstream 316809 20419133 ~ 20421573 (-)
XLOC_022309 CR749762.1 coding downstream 363986 20373314 ~ 20374396 (-)
XLOC_022308 si:rp71-17i16.5 coding downstream 375121 20357247 ~ 20363261 (-)
XLOC_022314 NA coding upstream 65118 20829345 ~ 20836604 (-)
XLOC_022315 NA coding upstream 94086 20858313 ~ 20938578 (-)
XLOC_022316 NA coding upstream 239979 21004206 ~ 21007954 (-)
XLOC_022317 megf6a coding upstream 355365 21119592 ~ 21215520 (-)
XLOC_022318 her12 coding upstream 680695 21444922 ~ 21446985 (-)
XLOC_022307 NA non-coding downstream 383458 20348459 ~ 20354924 (-)
XLOC_022295 NA non-coding downstream 792960 19944173 ~ 19945422 (-)
XLOC_022294 CT574579.1 non-coding downstream 830438 19907828 ~ 19907944 (-)
XLOC_022324 NA non-coding upstream 882475 21646702 ~ 21649875 (-)
XLOC_022325 NA non-coding upstream 890047 21654274 ~ 21695061 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_06507334_06512409 ZNF362B, ZNF362 coding CI01000001 null 6506173 ~ 6512409 (-)