XLOC_022412


Basic Information

Item Value
gene id XLOC_022412
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 27652896 ~ 27675394 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045022
TGCACATACAAAGAGAGATGGTGCTCGACGTAAAGTGAGGTAACATGACCTCCCTGAAAGAACAGGAGAAATATGACATCTTGGTAAACCCAAATACTGCAAGAAGCCCATCTCAGGAGATGTTCTGTGATGTGTATGTGACGTCTACAGCAGTGCAGAGCTTCATCTGCCTGACCTTCAGTGGCCCTGCAATATGTTGCGACACTGATGGACAGTCTGTGTGCTGGTGCAGTTGAGGCAGCTCACATGGCAGCACCAGTGGAAAGTACAGTGGCATCTTTCGGTGACCTGCTCCATTCGAGTCTTGTATCCTCTTCCGCAGCACAGCAGCTCGCACCCATCCAGAGCTGGCGACGAACTGTTGCAGGTGTCGGGGATCTGCTCGATGGGATGCGCGATTGCTGCCTTTGTTGGCATACACAACTCGGGATGCGCCGTCAAAACGGTCCTTCAGGTTGGTCAGATAGCGTAGATCTCTGCCCCTCTCGCTGGAATCCACAAACTCTCGTCCAAACATCCTGCCAAATTCCACATTGTCGCTGCAGCCTCCCCAGTGCCagtctggccctccaggaccacgGCGCCGGTAGTCACAGGTGCAGGACTCAATGGCCCCTTCAGAGCAGGACCGAGCCACGGCGCCTGTTGTCTCTTACCACCACCGGCCGCTGTTGTTGACCGCCCCTGTGCCAGTGAGAGAGGACACCAGGAGGACACATGCCGCTTTAACTGCGAGAAGCAACGCGAGAACCCGCATGATATCTGAAAGGGCAAAGTTAACCAATTAACCTCAAATCAGATTCACGCAATAGCACACA

Function

GO:

id name namespace
GO:0001672 regulation of chromatin assembly or disassembly biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045022 True 818 lncRNA 0.54 6 27652896 27675394

Neighbor

gene id symbol gene type direction distance location
XLOC_022411 wnt10b coding downstream 5127 27641471 ~ 27647769 (-)
XLOC_022410 arf3a coding downstream 19166 27622020 ~ 27633730 (-)
XLOC_022409 phf8 coding downstream 44639 27591366 ~ 27608257 (-)
XLOC_022407 si:ch211-156j22.4 coding downstream 63067 27575539 ~ 27589829 (-)
XLOC_022408 CR354381.1 coding downstream 72604 27580164 ~ 27580292 (-)
XLOC_022413 ikzf4 coding upstream 7620 27683014 ~ 27695173 (-)
XLOC_022414 dnajc22 coding upstream 21300 27696694 ~ 27702561 (-)
XLOC_022415 NA coding upstream 51901 27727295 ~ 27729454 (-)
XLOC_022416 NA coding upstream 95087 27770481 ~ 27772372 (-)
XLOC_022417 NA coding upstream 112975 27788369 ~ 27795923 (-)
XLOC_022400 NA non-coding downstream 453801 27191956 ~ 27199095 (-)
XLOC_022396 NA non-coding downstream 637736 26961010 ~ 27015160 (-)
XLOC_022393 NA non-coding downstream 893336 26749407 ~ 26759560 (-)
XLOC_022392 CR855310.1 non-coding downstream 977126 26675652 ~ 26675770 (-)
XLOC_022427 NA non-coding upstream 757781 28433175 ~ 28453703 (-)
XLOC_022432 CR677617.1 non-coding upstream 1510458 29185852 ~ 29257716 (-)

Expression


Co-expression Network