trnaa-agc-2


Basic Information

Item Value
gene id trnaa-agc-2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 11601460 ~ 11601532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-agc-2
ggggaattagctcaaatggtagagcgctcgcttagcatgcgagaggtagcgggatcgatgcccgtaTTCTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-agc-2 True 73 mRNA 0.47 1 11601460 11601532

Neighbor

gene id symbol gene type direction distance location
LOC110523192 plk2 coding upstream 88198 11507689 ~ 11513262 (+)
LOC110524952 NA coding upstream 94176 11502643 ~ 11507284 (+)
LOC110523188 pde4d coding upstream 182527 11026101 ~ 11418933 (+)
depdc1b depdc1b coding upstream 596819 10984720 ~ 11004641 (+)
LOC110523186 LOC106571348 coding upstream 616947 10974098 ~ 10984513 (+)
phax phax coding downstream 202388 11803920 ~ 11808076 (+)
lmnb1 lmnb1 coding downstream 231377 11832909 ~ 11854832 (+)
LOC110523202 NA coding downstream 318206 11919738 ~ 11922926 (+)
megf10 megf10 coding downstream 345469 11947001 ~ 12051563 (+)
prrc1 prrc1 coding downstream 455420 12056952 ~ 12093392 (+)
G367480 NA non-coding upstream 9082 11591912 ~ 11592378 (+)
G367436 NA non-coding upstream 46728 11554497 ~ 11554732 (+)
G367431 NA non-coding upstream 48626 11552495 ~ 11552834 (+)
G367424 NA non-coding upstream 54172 11547044 ~ 11547288 (+)
G367420 NA non-coding upstream 58621 11542598 ~ 11542839 (+)
G367505 NA non-coding downstream 7187 11608719 ~ 11611874 (+)
G367506 NA non-coding downstream 11776 11613308 ~ 11613608 (+)
G367520 NA non-coding downstream 16588 11618120 ~ 11618340 (+)
G367529 NA non-coding downstream 30956 11632488 ~ 11632839 (+)
G367530 NA non-coding downstream 31487 11633019 ~ 11633228 (+)
G366973 NA other upstream 172750 11425642 ~ 11428710 (+)
G366748 NA other upstream 624308 10976682 ~ 10977152 (+)
G365197 NA other upstream 1752306 9848703 ~ 9849154 (+)
G364850 NA other upstream 2372229 9228838 ~ 9229231 (+)
cdc42se2 cdc42se2 other upstream 2755344 8775134 ~ 8849107 (+)
G367684 NA other downstream 276797 11878329 ~ 11880035 (+)
G368440 NA other downstream 1507164 13108696 ~ 13109134 (+)
G369763 NA other downstream 2163715 13765247 ~ 13769296 (+)
G370360 NA other downstream 2654271 14255803 ~ 14259133 (+)
G370382 smarcb1 other downstream 2719572 14321104 ~ 14325895 (+)

Expression


Co-expression Network