si:dkey-34e4.1 (LOC106569177)


Basic Information

Item Value
gene id si:dkey-34e4.1
gene name LOC106569177
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16218314 ~ 16410253 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976925.1
agggtggtatgagggcccgacgtccttTTTAAGTAAAGGGTTATTTAATCTCGTACAAAGAACCAAAACGTAATGTATAGATCCCCAaataacctttttttctaagatacACTCTACTGTTGCTACATTGTaggcagtggtgtagtggtactGGTCATCAAAAGTTGGCTTCAATAGGCTCTTCACCAGGGTTAGTTTTTACAATCTGAAATCAATAAAGTCAAAAACCATGTTACACTGTGATGTGATTTTAAAGAAACGGCCTTGACAGGACAGAAAGGGTGGGACATGTACTATTATTTATGGTTGAGTGTTTATTTTGTCGACGCTTCCAAAAAACACTGGGTTACGTCATGTATTGGAACTTTGCTCCAATCAGGACTCGCTCTGAACTAACGTCTATGGCTTTGAAGCGGGAGGGCTCAGCGTCAATGCTACCAACAATGGCCGAGATTCAAAAACACCGGCAAAGCGACATCCACCAGCAAGCGGCCAACAGCCACCTGCAACAGACCCATGCTAGGGCTACCTGAGAGAAGTTACTATTGTGGTTTAGTATTGGACAGTCTATGGGTTGATTAGGCTAGCTAAGCAGAGAACCCTGTATTGACAGAAGGAGTGTCAGCAGCAAGACTAGGCGCTCTTGGAATAAAAGAAAAAGAGGCGCCCAAATCTGTCCCTTCCGTGGACGGGTCCCCTCTCTGCGCTTTGAGCGCCACTCTCGCGGAGCTATCGCAACAATGGACTCAGGTCTCCACGGGGAGCCCACTCTGTGTGCCACATCTCAGTGGGTCAGTGGTGGATATGCCTCGTAACGTGTGTTCTTTCCCATGTTAACATCGTTCTCTGGTAGTGTTTCCTTCACTCGCGTTTGGTAGGTCCAGAGGAATAGGACTGAAGATGCCTGGACGGAACAGGTACAATCTGGTGGACGATGTCGCGGATTCGCGGGTCCCCCTCCATAACGAAGAAGCGTACCAACACGGGATACATTTTCAAGCTAAGTATGTGGGCAGTCTGGATGTTCCCAGGCCCAACAGTCGTATGGAGATCGTAGCAGCCATGAGGAGGATCAGGTATGAGTTCAAGGCCAAGAACATCAAGAAGAAAAAAGTGAGCATCATCGTGTCTGTGGACGGAGTCAAGGTAGTCCTCCGGAAGAAACAGAAGAGGAAAGAGTGGACCTGGGACGAGAGCAAGATGCTGATCATGTCTGACCCCATATACAGGATTTTCTACGTGTCTCATGACTCCCAGGACCTGAAGATCTTCAGCTACATCGCCAGAGATGGCTCCAACAACTCCTTCAGGTGTAACGTCTTCAAATCCAAGAAGAAGACCCAGGCCATGCGTATAGTGCGTACGGTGGGCCAGGCGTTTGAGGTGTGTCATAAGCTTAGTCTGCAGCACGCCCATCAGGGTATAGATGGACAGGCAGACGGAGAGAGTGAGAAGTCCACAGAGGACAGCCCCgctgaggGTCGTCAGTtgacaggggtggaggaggaggaggggagtggagaggaaggggagcCCCAGGCACAGTCCCAGTCTGTGTGTGAGCAGGCGGTCAACGAGATCCTCCAGAGTCTGGCCCAACTTAACGTGGTCCAGCCTGGACACACCATCATGGACTATGAGAGCCGCTCCAGCTACATGGTGTCTCCGAATGGCGTGGTTTCTCCCAGCAGCCCCTGCTCTCCGCTTCTGACCCCGCTGGCGGCGCATCACTACCTCCAGCTCCTCCAACAGCAgatccagcagcagcagcaacacacACAGGTGGCTGTCgcacagGTGCAGCTCCTGAAGGATCAGATGTCAGTGGAGACCGCAGCTCGTGTAGAGGCTCAGGCTCGTGTCCACCAGCTGCTACTACAGAACAGAGACCTGCTCCAGCACCTGTCCCTGCTGGTCACACAGCTCAAACACCTGGAGAGCAAGGCACCGGGACCGGGGGAGAGACACACAACTGGACTGGGACCGGGGGAGAGACAGGATCACAATGATCAGGAGTCGTCATGGACGACCAGGTCTCTGTCACTCAACCTGAAAAACCATTACAGCTTGAGCAGCATGGACCAGCCCATCACCTCCACCCCTGCAGGGCCACTCCAAACCCCCCCCCTCACCGCTTCCCAGGTGGATGGTGCCGAGTCCTACCTCAACCTCCTCAACCTGGAGAATGGGACCAAACCACTGGGCTCTCAAAacgggggggagacggagacagacacaCTCATCAGAAGAACATCCAATGGGAAGCCAGGGCGGAAAGACAGCTCGGAAGTGTCGTCAAATGAGATTGTGCGGTTCGAAACAAGGAATTTGACAGCCCTGGATGAAAGGTTTAAACAGATCATCCCTAAATTGGACCCGCCTCCCCCGTCCTTCAACCGTAAGCGAGCCAGCCGAACTGTCTCTCCGGGGTTGGAGTTCAACCCGCTGACCATGCCCCTGACCACACAAGTAGACGGGAATGGTGGCGTTCCGAGCCGGAGCGAGAGCCTGTCCTTCCCGGACATCACGCCCTGCTCCCTCTCTTCCGGACTCTCAGGAGACTTCCACCAGCTCAGCAACGGAGGCGGCGAGAGCGGCTCGTGCGGCTCAGCTAGCGAGGATTCCGGCGTCCGCTCCGAGACTAAATCGCATCTCTCGCCCCTCCACGACGAAGAGGACCCGTTTGGGGACAGGGGGGCATTCCTGACTGCCTCTAGCGGCTGTGGCAGCCCCCTAGAAGACATGAAGGGGGAAACTGCGCCCCTGTCATGCGTCACCACCACCCCAGGCACACACGCGGACAGCTACGAGCACAcgctccccttctcctcccccatcAATGACACCTGTCTGCACATCAGCTTCTCAGAGGATGAGTTGCTGGACAGCAGCCCTGAGGACTCCAGTGTCCCACAACGGAGCTAGGAAGACGGGCTGGGAGAGCTACTACAGGCCGTGACTTCATTTGAGGCCTCTGGGGCTGGGGGCTCCTAGCTGACTGACACTGATGCTGCAACAGACACCACACAATAAAATGACTGACACAGACTGTTATCAGAGCTTCTAACGCACTCTGAAATGCAATAGTGTTTTGTAGGCCTCATTCGGTCCATATTCCTAAAATGTTGAGTGAGCTGGATTTCAAGACTAGTTTTTCTGTCCTTTCACAACACACAGCTGGACAGAATTGCGCATGACCTGAACATATTTCAACACATTCACAGAAAAGGAACATCAAAGGATCTATTATTCTATAAATTATTGccatatggacagatcctagtaTTTTTTATAGAGAATAATGATTGTATTTGTTATTAGTAAATAAGTAGAGAATTGAGAATAATCATGTAGCAGAAGTCTTTCACTGTTAATGTAGCCTATAGTGTCAGTGACAAGTTAGTAGTCAAGATGCTTTAGATGTATTTCATTACATGCTCTCAACTCATTTACAGGGTGTTCAACACCAAGCGTTACAGAAGTCAAAGTGACATACTGTAGGAATGTTGTGGGAACGTTGTGGGAACGTTGTGGGAACGTTGTGGGAACGTTGTGGGAACGTTGTGGGAACATTGGATGTGAAGTGCTGTGACGTTGAGAACAGCTGCCCTCTCTCAGGCATCAGACTATGAAGAGTTATGAAGAAAGGAACAGGGAAGTGATAGAAAAGGAACAGCGAATGGAAGAGAAGTGGTGAtggaactgtgtttgtgtgtttggtcACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTggtcactcacactcacactcacagtgTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGAATGTTGGTTTTAGGGCTAGAAGAGGCAATGTGATTGGCTGAATGTTGGTTTTAGGGCTAGAAGAGCCAATGTGATTGGCTGAATGTTGGTTTTAGGACTAGTAAACAGCTCTGATCGGAAAAGCTGGCAAATGGCCTGATCAGCAGTGAAACCTAACATATGGTGTTACATATCCAAGTGGAATGGTGTTATTAGATGAATGGTGAGGCATGAAAGGTTTTATAGCCCCTCTTAATGGCAAAAGGTTTTCAGGGATTTTTAGCTTTGATCAGAAGACCTACAGAGTGGAACAATAATTGGGAATCAGCGAGAGGCCTCAGGAGAAAAGACAAACTCACTGATgaattatatctctctctctctctctctatttcactttctctatttatctatctatctctctgaagTTCGGAATGACAGGGTATTTTTGCTAAGCCTGAGAGTTTGGGTCTCAGTTTAAATGAAGGAGATAGTGACATTACTGCTGAGTGTTTGTTCATTTGGGGAATGGGAGGAAGCGAGAGATAGGAAAAAGTGTCATAACAGGTTAAAACAGGGTTAGTTCAGTAATTGTCTGTAAACATGGTCTCATGGTGAGAAACATGGCGATTGTCTCATCTCCATACTTACACAGGCTTTCTGTATGACAACTACAACAATAACAGATATATTTATATGCATGACTAGTCTAGGGCTTTATTTCTGGCCAGGTCACATGGTCATGAACAACTCCTGGCCTTGAGAGTGAGATAATGAGATTGAGTTAAACTGACGACTTAAAATGAATTGAACAATAGTACCTACTCTAAATGTAGGCTTATTCTGGATGGCAGTTTGAGGTGATGACGAGGTGGTTAAGGAGAGATATGATTGGACGGCAGTACGGGTGTCGACTGGTGATTGGCAAGAAGGAATCGGAGGAGCTGAAGAGAGGGCGGCTTTTCTTTCCCACACTTTGAAGGAGAGAAACACAGCAATAATAAAGGAATGAATGAATAAAAGACGAGTTGAACAAC
>XM_036976926.1
agactccatgagggtggtatgagggcccgacgtccttTTTAAGTAAAGGGTTATTTAATCTCGTACAAAGAACCAAAACGTAATGTATAGATCCCCAaataacctttttttctaagatacACTCTACTGTTGCTACATTGTaggcagtggtgtagtggtactGGTCATCAAAAGTTGGCTTCAATAGGCTCTTCACCAGGGTTAGTTTTTACAATCTGAAATCAATAAAGTCAAAAACCATGTTACACTGTGATGTGATTTTAAAGAAACGGCCTTGACAGGACAGAAAGGGTGGGACATGTACTATTATTTATGGTTGAGTGTTTATTTTGTCGACGCTTCCAAAAAACACTGGGTTACGTCATGTATTGGAACTTTGCTCCAATCAGGACTCGCTCTGAACTAACGTCTATGGCTTTGAAGCGGGAGGGCTCAGCGTCAATGCTACCAACAATGGCCGAGATTCAAAAACACCGGCAAAGCGACATCCACCAGCAAGCGGCCAACAGCCACCTGCAACAGACCCATGCTAGGGCTACCTGAGAGAAGTTACTATTGTGGTTTAGTATTGGACAGTCTATGGGTTGATTAGGCTAGCTAAGCAGAGAACCCTGTATTGACAGAAGGAGTGTCAGCAGCAAGACTAGGCGCTCTTGGAATAAAAGAAAAAGAGGCGCCCAAATCTGTCCCTTCCGTGGACGGGTCCCCTCTCTGCGCTTTGAGCGCCACTCTCGCGGAGCTATCGCAACAATGGACTCAGGTCTCCACGGGGAGCCCACTCTGTGTGCCACATCTCAGTGGGTCAGTGGTGGATATGCCTCGTAACGTGTGTTCTTTCCCATGTTAACATCGTTCTCTGGTAGTGTTTCCTTCACTCGCGTTTGGTAGGTCCAGAGGAATAGGACTGAAGATGCCTGGACGGAACAGGTACAATCTGGTGGACGATGTCGCGGATTCGCGGGTCCCCCTCCATAACGAAGAAGCGTACCAACACGGGATACATTTTCAAGCTAAGTATGTGGGCAGTCTGGATGTTCCCAGGCCCAACAGTCGTATGGAGATCGTAGCAGCCATGAGGAGGATCAGGTATGAGTTCAAGGCCAAGAACATCAAGAAGAAAAAAGTGAGCATCATCGTGTCTGTGGACGGAGTCAAGGTAGTCCTCCGGAAGAAACAGAAGAGGAAAGAGTGGACCTGGGACGAGAGCAAGATGCTGATCATGTCTGACCCCATATACAGGATTTTCTACGTGTCTCATGACTCCCAGGACCTGAAGATCTTCAGCTACATCGCCAGAGATGGCTCCAACAACTCCTTCAGGTGTAACGTCTTCAAATCCAAGAAGAAGACCCAGGCCATGCGTATAGTGCGTACGGTGGGCCAGGCGTTTGAGGTGTGTCATAAGCTTAGTCTGCAGCACGCCCATCAGGGTATAGATGGACAGGCAGACGGAGAGAGTGAGAAGTCCACAGAGGACAGCCCCgctgaggGTCGTCAGTtgacaggggtggaggaggaggaggggagtggagaggaaggggagcCCCAGGCACAGTCCCAGTCTGTGTGTGAGCAGGCGGTCAACGAGATCCTCCAGAGTCTGGCCCAACTTAACGTGGTCCAGCCTGGACACACCATCATGGACTATGAGAGCCGCTCCAGCTACATGGTGTCTCCGAATGGCGTGGTTTCTCCCAGCAGCCCCTGCTCTCCGCTTCTGACCCCGCTGGCGGCGCATCACTACCTCCAGCTCCTCCAACAGCAgatccagcagcagcagcaacacacACAGGTGGCTGTCgcacagGTGCAGCTCCTGAAGGATCAGATGTCAGTGGAGACCGCAGCTCGTGTAGAGGCTCAGGCTCGTGTCCACCAGCTGCTACTACAGAACAGAGACCTGCTCCAGCACCTGTCCCTGCTGGTCACACAGCTCAAACACCTGGAGAGCAAGGCACCGGGACCGGGGGAGAGACACACAACTGGACTGGGACCGGGGGAGAGACAGGATCACAATGATCAGGAGTCGTCATGGACGACCAGGTCTCTGTCACTCAACCTGAAAAACCATTACAGCTTGAGCAGCATGGACCAGCCCATCACCTCCACCCCTGCAGGGCCACTCCAAACCCCCCCCCTCACCGCTTCCCAGGTGGATGGTGCCGAGTCCTACCTCAACCTCCTCAACCTGGAGAATGGGACCAAACCACTGGGCTCTCAAAacgggggggagacggagacagacacaCTCATCAGAAGAACATCCAATGGGAAGCCAGGGCGGAAAGACAGCTCGGAAGTGTCGTCAAATGAGATTGTGCGGTTCGAAACAAGGAATTTGACAGCCCTGGATGAAAGGTGTGAGGAACCCCTCTTGCTCATCCTCGTCTTAATCTAACCCTTCCATCCCTAACCAGTAACCTTCCCATCCCTAACCAGTAACCTCCCCCATCCCTAACCAGTAACCTCCCCCATTCCTAACCAGTAACCTCCCCCATTCCTAACCAGTAACCTCCCCCATCCCTAACCAGTAACCTCCCCCATTCCTAACCAGTAACCTCCCCCATTCCTAACCAGTAACCTCCCCCATTCCTAACCAGTAACCTCCCCCATCCCTAACCAGTAACCTCCCCCATCCCTAACCAGTAACT
>TU423710
TTGTGGGAACGTTGTGGGAACATTGGATGTGAAGTGCTGTGACGTTGAGAACAGCTGCCCTCTCTCAGGCATCAGACTATGAAGAGTTATGAAGAAAGGAACAGGGAAGTGATAGAAAAGGAACAGCGAATGGAAGAGAAGTGGTGAtggaactgtgtttgtgtgtttggtcACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTggtcactcacactcacactcacagtgTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGATGTGTTTGGTCACTCACACTCATACTCACAGTGTGGTAGTTTGATGAATGTTGGTTTTAGGGCTAGAAGAGGCAATGTGATTGGCTGAATGTTGGTTTTAGGGCTAGAAGAGCCAATGTGATTGGCTGAATGTTGGTTTTAGGACTAGTAAACAGCTCTGATCGGAAAAGCTGGCAAATGGCCTGATCAGCAGTGAAACCTAACATATGGTGTTACATATCCAAGTGGAATGGTGTTATTAGATGAATGGTGAGGCATGAAAGGTTTTATAGCCCCTCTTAATGGCAAAAGGTTTTCAGGGATTTTTAGCTTTGATCAGAAGACCTACAGAGTGGAACAATAATTGGGAATCAGCGAGAGGCCTCAGGAGAAAAGACAAACTCACTGATgaattatatctctctctctctctctctatttcactttctctatttatctatctatctctctgaagTTCGGAATGACAGGGTATTTTTGCTAAGCCTGAGAGTTTGGGTCTCAGTTTAAATGAAGGAGATAGTGACATTACTGCTGAGTGTTTGTTCATTTGGGGAATGGGAGGAAGCGAGAGATAGGAAAAAGTGTCATAACAGGTTAAAACAGGGTTAGTTCAGTAATTGTCTGTAAACATGGTCTCATGGTGAGAAACATGGCGATTGTCTCATCTCCATACTTACACAGGCTTTCTGTATGACAACTACAACAATAACAGATATATTTATATGCATGACTAGTCTAGGGCTTTATTTCTGGCCAGGTCACATGGTCATGAACAACTCCTGGCCTTGAGAGTGAGATAATGAGATTGAGTTAAACTGACGACTTAAAATGAATTGAACAATAGTACCTACTCTAAATGTAGGCTTATTCTGGATGGCAGTTTGAGGTGATGACGAGGTGGTTAAGGAGAGATATGATTGGACGGCAGTACGGGTGTCGACTGGTGATTGGCAAGAAGGAATCGGAGGAGCTGAAGAGAGGGCGGCTTTTCTTTCCCACACTTTGAAGGAGAGAAACACAGCAATAATAAAGGAATGAATGAATAAAAGACGAG

Function

NR:

description
PREDICTED: carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976925.1 False 5009 mRNA 0.49 11 16218314 16410243
XM_036976926.1 False 2651 mRNA 0.52 11 16244917 16410253
TU423710 True 1450 lncRNA 0.42 1 16218323 16219772

Neighbor

gene id symbol gene type direction distance location
LOC118964745 NA coding downstream 13312 16203690 ~ 16205002 (-)
garnl3 LOC106562762 coding downstream 97004 15938951 ~ 16121310 (-)
LOC110523317 LOC106568982 coding downstream 291671 15902216 ~ 15926643 (-)
LOC118964569 LOC106594099 coding downstream 319020 15898677 ~ 15899294 (-)
LOC118964568 LOC106568982 coding downstream 323136 15872778 ~ 15895178 (-)
LOC110523325 LOC106569195 coding upstream 6728 16416981 ~ 16422022 (-)
LOC110522841 LOC106569125 coding upstream 17250 16427503 ~ 16430780 (-)
ppiab ppia1 coding upstream 63837 16474090 ~ 16479578 (-)
LOC118964764 NA coding upstream 64944 16475197 ~ 16475278 (-)
LOC118964765 NA coding upstream 65524 16475777 ~ 16475856 (-)
G372267 NA non-coding downstream 9521 16208547 ~ 16208793 (-)
G372264 NA non-coding downstream 11696 16206390 ~ 16206618 (-)
G372263 NA non-coding downstream 12020 16206073 ~ 16206294 (-)
G372250 NA non-coding downstream 18968 16198864 ~ 16199346 (-)
G372239 NA non-coding downstream 32745 16185183 ~ 16185569 (-)
G372816 NA non-coding upstream 25759 16436012 ~ 16437300 (-)
G372876 NA non-coding upstream 168826 16579079 ~ 16579741 (-)
G372892 NA non-coding upstream 213842 16624095 ~ 16624702 (-)
G372901 NA non-coding upstream 234976 16645229 ~ 16646216 (-)
G372909 NA non-coding upstream 253392 16663645 ~ 16664178 (-)
G372123 NA other downstream 237099 15978502 ~ 15981215 (-)
G372122 NA other downstream 242198 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 519985 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1093525 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1223155 14988147 ~ 14995197 (-)
LOC110523341 LOC106569324 other upstream 523982 16909582 ~ 16942359 (-)
G373228 LOC106569424 other upstream 713784 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 1078773 17483696 ~ 17521507 (-)
G374189 NA other upstream 1592567 18002820 ~ 18003170 (-)
G374786 NA other upstream 2147887 18558140 ~ 18559167 (-)
G372704 NA non-coding upstream 16557 16236329 ~ 16236533 (-)
G372705 NA non-coding upstream 18601 16238373 ~ 16238609 (-)
G372706 NA non-coding upstream 19316 16239088 ~ 16239357 (-)
G372707 NA non-coding upstream 21180 16240952 ~ 16241159 (-)
G372709 NA non-coding upstream 26225 16245997 ~ 16246275 (-)

Expression


Co-expression Network