sec14l7 (LOC106569318)


Basic Information

Item Value
gene id sec14l7
gene name LOC106569318
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16872284 ~ 16896878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976955.1
gcatgggaggtgtgtgtgtgacagtgaagACCACTTGATTCCACCGGAGGTCATTCACAGAAAGTGATTTACTGGAGCGCCTGCGCGGCAAATCGTAACAGAGAGAATGAGCAGACGAGTGGGCGACCTCAGCCCGAAGCAGGTGGACATTTTAGCCGAGTTTCGGGAGCGGCTTGAGGACGTTCTACCAGACCTTCCCGCGCAGCATGATCACTACCTGCTCCGCTGGCTCCGAGCCCGAAGCTTCAATGTTCAGAAAGCAGAGGCGATGCTTAGAAAGCATCTGGAGTTCAGGAAACACATGAAAGCAGACAGCATCATCGCTGACTGGAGGCCTCCTGAGGTGATCGAACGGTATGTGTCCGGGGGGATGTGTGGGTACGACCTCGAGGGAAGTCCCATCTGGTATGATGTCATTGGGCCCCTGGACCCCAAAGGTCTGCTGCTGTCCTGCACCAAACAGGACTTCATGAGGACCAAGATCAGAGACACAGAGATGCTCCGCAGAGAGtgtcagaaacagacagagaagttgGGCGTTAATGTGGAGACGATAACCCTGATCTATGACTGTGAGGGACTGGGCCTGAAGCACCTGTGGAAGCCTGCTTTAGAGGCCTATGGAGAGATTCTTACCATGTTTGAGGAGAACTATCCTGAAGGACTCAAGAGGGTGTTTCTCATCAAGActcCTAAGCTATTCCCGATGGCCTACAACCTGGTCAAACACTTCCTGAGTGAAGAGACACGTCACAAGATCATCATTCTGGGATcTAACTGGCAGGAGGTGTTACTTAAGCACATTGACCCGGAGCAACTCCCGGTGGCGTACGGAGGAACCCTTACTGACCCTGATGGTGACCCTCGCTGTCGAACCAtggtgagaaagagggagggagggagcgaggacttccacaaagctgtgaacgatctgagagacaagATAAACTACGGCGGTACGGTGCCCAGGTCGTACTATGTTCAGGACAATATGGTCAAGGTCCAGTACGACAACAGTGTGACCATCAGCCGAGGCTCCGCCTTCACACTGGAGTATGACATCACCACCCCCAGCAGCATCCTCAGgTGGCAGTTTGCCAGTGATGGGGCAGACATAGGCTTTGGGGTGTTCATGCGGACCCAGGAGGGGGGTGGGGCTCAGAAGGTGGGGGACATGCTGCAGGTGGTGCCTAGTGAACGCTACAACTCACACATGGTCCCAGAGGACCGCTCACTCACCTGCCCCGAGCCTGGAACTTACGTGCTGCGTTTTGACAACACCTACAGCGTGCTGCAGTCGAAGAAGATCAGCTACACTGTCAATGTTCTACTGCCAGACGGACAGACACAGAGCCCTAGGAGTATCAGAGGGGGTGGACGGCTggagtaacacacacacgcacaacacgCACGTACTAACAGACAGGCACAGAGCCCTAGGAGTATCAGAGGGGGTGGACGGCTggagtaacacacacacgcacaacacgCACGtactaacagacagacacagagcccTAGGAGTATCAGAGGGGATGGAAGGCtggagtaacacacacacaaca
>XM_036976956.1
gcatgggaggtgtgtgtgtgacagtgaagACCACTTGATTCCACCGGAGGTCATTCACAGAAAGTGATTTACTGGAGCGCCTGCGCGGCAAATCGTAACAGAGAGAATGAGCAGACGAGTGGGCGACCTCAGCCCGAAGCAGGTGGACATTTTAGCCGAGTTTCGGGAGCGGCTTGAGGACGTTCTACCAGACCTTCCCGCGCAGCATGATCACTACCTGCTCCGCTGGCTCCGAGCCCGAAGCTTCAATGTTCAGAAAGCAGAGGCGATGCTTAGAAAGCATCTGGAGTTCAGGAAACACATGAAAGCAGACAGCATCATCGCTGACTGGAGGCCTCCTGAGGTGATCGAACGGTATGTGTCCGGGGGGATGTGTGGGTACGACCTCGAGGGAAGTCCCATCTGGTATGATGTCATTGGGCCCCTGGACCCCAAAGGTCTGCTGCTGTCCTGCACCAAACAGGACTTCATGAGGACCAAGATCAGAGACACAGAGATGCTCCGCAGAGAGtgtcagaaacagacagagaagttgGGCGTTAATGTGGAGACGATAACCCTGATCTATGACTGTGAGGGACTGGGCCTGAAGCACCTGTGGAAGCCTGCTTTAGAGGCCTATGGAGAGATTCTTACCATGTTTGAGGAGAACTATCCTGAAGGACTCAAGAGGGTGTTTCTCATCAAGActcCTAAGCTATTCCCGATGGCCTACAACCTGGTCAAACACTTCCTGAGTGAAGAGACACGTCACAAGATCATCATTCTGGGATcTAACTGGCAGGAGGTGTTACTTAAGCACATTGACCCGGAGCAACTCCCGGTGGCGTACGGAGGAACCCTTACTGACCCTGATGGTGACCCTCGCTGTCGAACCAtggtgagaaagagggagggagggagcgaggacttccacaaagctgtgaacgatctgagagacaagATAAACTACGGCGGTACGGTGCCCAGGTCGTACTATGTTCAGGACAATATGGTCAAGGTCCAGTACGACAACAGTGTGACCATCAGCCGAGGCTCCGCCTTCACACTGGAGTATGACATCACCACCCCCAGCAGCATCCTCAGgTGGCAGTTTGCCAGTGATGGGGCAGACATAGGCTTTGGGGTGTTCATGCGGACCCAGGAGGGGGGTGGGGCTCAGAAGGTGGGGGACATGCTGCAGGTGGTGCCTAGTGAACGCTACAACTCACACATGGTCCCAGAGGACCGCTCACTCACCTGCCCCGAGCCTGGAACTTACGTGCTGCGTTTTGACAACACCTACAGCGTGCTGCAGTCGAAGAAGATCAGCTACACTGTCAATGTTCTACTGCCAGACGGACAGACACAGAGCCCTAGGAGTATCAGAGGGGGTGGACGGCTggagtaacacacacacgcacaacacgCACGtactaacagacagacacagagcccTAGGAGTATCAGAGGGGATGGAAGGCtggagtaacacacacacaaca
>XM_036976957.1
gcatgggaggtgtgtgtgtgacagtgaagACCACTTGATTCCACCGGAGGTCATTCACAGAAAGTGATTTACTGGAGCGCCTGCGCGGCAAATCGTAACAGAGAGAATGAGCAGACGAGTGGGCGACCTCAGCCCGAAGCAGGTGGACATTTTAGCCGAGTTTCGGGAGCGGCTTGAGGACGTTCTACCAGACCTTCCCGCGCAGCATGATCACTACCTGCTCCGCTGGCTCCGAGCCCGAAGCTTCAATGTTCAGAAAGCAGAGGCGATGCTTAGAAAGCATCTGGAGTTCAGGAAACACATGAAAGCAGACAGCATCATCGCTGACTGGAGGCCTCCTGAGGTGATCGAACGGTATGTGTCCGGGGGGATGTGTGGGTACGACCTCGAGGGAAGTCCCATCTGGTATGATGTCATTGGGCCCCTGGACCCCAAAGGTCTGCTGCTGTCCTGCACCAAACAGGACTTCATGAGGACCAAGATCAGAGACACAGAGATGCTCCGCAGAGAGtgtcagaaacagacagagaagttgGGCGTTAATGTGGAGACGATAACCCTGATCTATGACTGTGAGGGACTGGGCCTGAAGCACCTGTGGAAGCCTGCTTTAGAGGCCTATGGAGAGATTCTTACCATGTTTGAGGAGAACTATCCTGAAGGACTCAAGAGGGTGTTTCTCATCAAGActcCTAAGCTATTCCCGATGGCCTACAACCTGGTCAAACACTTCCTGAGTGAAGAGACACGTCACAAGATCATCATTCTGGGATcTAACTGGCAGGAGGTGTTACTTAAGCACATTGACCCGGAGCAACTCCCGGTGGCGTACGGAGGAACCCTTACTGACCCTGATGGTGACCCTCGCTGTCGAACCAtgATAAACTACGGCGGTACGGTGCCCAGGTCGTACTATGTTCAGGACAATATGGTCAAGGTCCAGTACGACAACAGTGTGACCATCAGCCGAGGCTCCGCCTTCACACTGGAGTATGACATCACCACCCCCAGCAGCATCCTCAGgTGGCAGTTTGCCAGTGATGGGGCAGACATAGGCTTTGGGGTGTTCATGCGGACCCAGGAGGGGGGTGGGGCTCAGAAGGTGGGGGACATGCTGCAGGTGGTGCCTAGTGAACGCTACAACTCACACATGGTCCCAGAGGACCGCTCACTCACCTGCCCCGAGCCTGGAACTTACGTGCTGCGTTTTGACAACACCTACAGCGTGCTGCAGTCGAAGAAGATCAGCTACACTGTCAATGTTCTACTGCCAGACGGACAGACACAGAGCCCTAGGAGTATCAGAGGGGGTGGACGGCTggagtaacacacacacgcacaacacgCACGTACTAACAGACAGGCACAGAGCCCTAGGAGTATCAGAGGGGGTGGACGGCTggagtaacacacacacgcacaacacgCACGtactaacagacagacacagagcccTAGGAGTATCAGAGGGGATGGAAGGCtggagtaacacacacacaaca

Function

NR:

description
PREDICTED: SEC14-like protein 2

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976955.1 False 1565 mRNA 0.54 12 16872284 16896878
XM_036976956.1 False 1484 mRNA 0.54 13 16872284 16896878
XM_036976957.1 True 1502 mRNA 0.54 12 16872284 16896878

Neighbor

gene id symbol gene type direction distance location
LOC118964572 LOC106569151 coding downstream 2830 16792247 ~ 16869454 (-)
LOC110523339 LOC106569301 coding downstream 86767 16771397 ~ 16785517 (-)
il1b NA coding downstream 115216 16754893 ~ 16757068 (-)
LOC110523337 LOC105007341 coding downstream 133874 16735640 ~ 16738410 (-)
gnsb gns coding downstream 160412 16692570 ~ 16711872 (-)
LOC110523341 LOC106569324 coding upstream 12704 16909582 ~ 16942359 (-)
LOC110523343 rl37 coding upstream 84038 16980916 ~ 16983503 (-)
LOC118964776 NA coding upstream 85379 16982257 ~ 16982335 (-)
LOC110523346 rnf165 coding upstream 174717 17071595 ~ 17090037 (-)
LOC110523345 LOC106569410 coding upstream 195393 17092271 ~ 17109143 (-)
G372989 NA non-coding downstream 12150 16859849 ~ 16860134 (-)
G372988 NA non-coding downstream 12578 16859407 ~ 16859706 (-)
G372987 NA non-coding downstream 13675 16858403 ~ 16858609 (-)
G372986 NA non-coding downstream 17538 16854534 ~ 16854746 (-)
G372984 NA non-coding downstream 29992 16841632 ~ 16842292 (-)
G373043 NA non-coding upstream 66756 16963634 ~ 16971788 (-)
G373055 NA non-coding upstream 88310 16985188 ~ 16985423 (-)
G373006 NA non-coding upstream 93988 16990866 ~ 16991941 (-)
G373196 NA non-coding upstream 144609 17041487 ~ 17041725 (-)
G373208 NA non-coding upstream 158005 17054883 ~ 17055162 (-)
G372123 NA other downstream 891069 15978502 ~ 15981215 (-)
G372122 NA other downstream 896168 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 1173955 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1747495 15123475 ~ 15124789 (-)
LOC110524957 LOC106569957 other downstream 1877125 14988147 ~ 14995197 (-)
G373228 LOC106569424 other upstream 227159 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 592148 17483696 ~ 17521507 (-)
G374189 NA other upstream 1105942 18002820 ~ 18003170 (-)
G374786 NA other upstream 1661262 18558140 ~ 18559167 (-)

Expression


Co-expression Network