LOC110523343 (rl37)


Basic Information

Item Value
gene id LOC110523343
gene name rl37
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 16980916 ~ 16983503 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601960.2
TTAGTACTCTGTCCGCTATTTGTTGAAATAAACGCTTATCCTACTTAAGGGGGCTTATTTTACTGTTACACCCGGAACAACCTCGATTGGGATTTAATGCAACACCAAACGCTTTTCCGGTCTCTTTTCACCCACCCATAAGAAGAAAATGACGAAGGGTACATCGTCCTTCGGAAAGCGGCGTAATAAGACGCACGCTCTGTGCCGTCGCTGTGGCTCCAAGGCTTACCACCTGCAGAAGTCGTCCTGCGGGAAGTGTGGGTATCCCGAGAAACGCAAGAGAAGGTACAACTGGAGCGCTAAGGCCAAGAGGAGGAACACCACTGGGTCTGGCCGCCTGAGACACCTGCGAGTCGTCTACCGCAGATTCAGGAATGGGTTCCGGGAAGGGACCACCCCAAAGCCTAAGCGTGCTGCAGTGGCTGCCTCCAGCTCGTCCTAGACACACTTTGGATTTACTTGTTTAAATAAATGTGCTGTTGATAGTT

Function

NR:

description
60S ribosomal protein L37

GO:

id name namespace
GO:0006412 translation biological_process
GO:0005840 ribosome cellular_component
GO:0046872 metal ion binding molecular_function
GO:0019843 rRNA binding molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02922 RP-L37e, RPL37; large subunit ribosomal protein L37e

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601960.2 True 488 mRNA 0.51 4 16980916 16983503

Neighbor

gene id symbol gene type direction distance location
LOC110523341 LOC106569324 coding downstream 38557 16909582 ~ 16942359 (-)
sec14l7 LOC106569318 coding downstream 84038 16872284 ~ 16896878 (-)
LOC118964572 LOC106569151 coding downstream 111462 16792247 ~ 16869454 (-)
LOC110523339 LOC106569301 coding downstream 195399 16771397 ~ 16785517 (-)
il1b NA coding downstream 223848 16754893 ~ 16757068 (-)
LOC110523346 rnf165 coding upstream 88092 17071595 ~ 17090037 (-)
LOC110523345 LOC106569410 coding upstream 108768 17092271 ~ 17109143 (-)
haus1 haus1 coding upstream 133865 17117368 ~ 17119941 (-)
hwa LOC106569438 coding upstream 164345 17147848 ~ 17150076 (-)
LOC110523350 LOC106569446 coding upstream 169961 17153464 ~ 17158078 (-)
G373043 NA non-coding downstream 9128 16963634 ~ 16971788 (-)
G372989 NA non-coding downstream 120782 16859849 ~ 16860134 (-)
G372988 NA non-coding downstream 121210 16859407 ~ 16859706 (-)
G372987 NA non-coding downstream 122307 16858403 ~ 16858609 (-)
G372986 NA non-coding downstream 126170 16854534 ~ 16854746 (-)
G373055 NA non-coding upstream 1685 16985188 ~ 16985423 (-)
G373006 NA non-coding upstream 7363 16990866 ~ 16991941 (-)
G373196 NA non-coding upstream 57984 17041487 ~ 17041725 (-)
G373208 NA non-coding upstream 71380 17054883 ~ 17055162 (-)
G373209 NA non-coding upstream 72810 17056313 ~ 17056542 (-)
G372123 NA other downstream 999701 15978502 ~ 15981215 (-)
G372122 NA other downstream 1004800 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 1282587 15693396 ~ 15707607 (-)
G371294 LOC106569911 other downstream 1856127 15123475 ~ 15124789 (-)
G373228 LOC106569424 other upstream 140534 17124037 ~ 17125807 (-)
LOC110523354 LOC106569496 other upstream 505523 17483696 ~ 17521507 (-)
G374189 NA other upstream 1019317 18002820 ~ 18003170 (-)
G374786 NA other upstream 1574637 18558140 ~ 18559167 (-)
G377800 NA other upstream 3710593 20694096 ~ 20694708 (-)

Expression


Co-expression Network