LOC110523350 (LOC106569446)


Basic Information

Item Value
gene id LOC110523350
gene name LOC106569446
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 17153464 ~ 17158078 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021601973.2
TAACGATTAATTTCTCTGATCATATAGCCTCAAGGGATTGTTCAATCCAATGGTCCATGTCAGGGGGATTAAATAGCCTCTAGGGATGTCTATCTGTCAGTCAGTCTTCAGTCGACAACCCTCGACAGCTCTGAGGATTCACCTCACTGGTCGTGACTGTTCCATGAGCTTCTGCTCAGAATTCCGGAAACGAGCCTCaagaaggagaaggaggctgTTACATCCGCGTGATAATGCTGCGAACACCAATGGTCTCTAGGAGAAATCGGTAGGCACGGTATTCCCTCTTGTGCGTATGAAAATGGGCGGGTTTTGGGAAAGCTCAGTCACGCTGCGTGGGTGGTGAGTGTATAGTAAAGGGCTGCGGCGGCGGTATATAGCACAGTCTGCAGTCAGCGGTTCAGTCAACCAACAGCTCAAGCACAGCTAAAACAGCTAAGAAACGTTCAGCACCACAGAACAGCGGACAGCTCCTCAATAAGAGAACACTATGGTTCTGATCTGGACACAGTTTGGAGTGAAAACCAAAAATGTCAAGTGCAAGGTCCGCGTTATGAACAGGAATGACAGCTCGGGCTCTTCATCAGGGGAGAACCAAAAGGACCAAGAGGTGCCTGTTATGTCCATCAAGCCTATGGGGAAGGATTTCTACAAGGTCCTGGGCGTGGAGACAGACTCCAACGAAGATGAGATCAAGAAGGGATACAGGAAGATGGCCCTAAAGTTTCACCCCGACAAGAACAGCGCCGCTGACGCCGCAGACAAGTTCAAGGAGATCGCAGAAGCTTACGAGATTCTGACCGACCCCAAGAAGAGAGTCATCTATGATCAGTTTGGAGAAGAAGGTCTTAAGAACGGAGGCGGAGTGTCCATGGCAGGCAAGGAGAACAACACCCATCAGTACAGTTACCACGGTGACGCCCATGCCACATTCTCCTCCTTCTTCCAAGGTTCCGACCACTTCGACATCTTCTTCGGGCCCGACGGCGAGGAGGAGCTCTTCAACCCCTTCAGCCGCTTCACCTTCAGCCACGTCGGTGGTTACCACAGTAACTATGGCCCCACTGGCGAGAAGCTTCGGCGCGGACGTCGGCGTCTGCAAGGCATGGCGGTGGTGCACGACCTCCTGGTGACCCTGGAAGAGGTGTTCCATGGCTGCACCAAGCACATGAAGATCACTCGGCGCCGTCTCAACCCGGACGGCCGCAGCCTGCGCACCGAGGACAAGGTCCTGAACGTGGTGGTAAAGAAGGGGTGGAAGGAAGGTACCAAGATCACCTTCCCCAGAGAGGGCGATGAGACGCCCAACAACATACCCGCCGACGTGGCCTTCGTTCTCAAGGACAAGAAACACCCCCACTACAAGAGGGATGGGTCCCACATTGTGTATACAGCCAAGATCACCCTCAAAGAAGCTCTATGTGGATGCACAGTCAACGTCCCCACCCTGGACAACAGGACGATGCCGCTGCCGTGCAGTGATGTCATCAAGCCCGGCGGCATCCGGCGGCTGAGGGGCGAGGGCCTGCCCCACGCCAAGACCCCGTCCACACGTGGCGACCTGGTGGTGGAATTCCAGGTGGCCTTCCCTGACAGGATCCCTCCCCAGTCCAAAGAGATCATCAAACACAGCCTCGCTGGGTGCTAATGGGCTAACGTCCTAGCATGCTATTGTGCTAACGACCTACTGTTTGAGCTAATAAAATCACAGCCTTGCCAGGTGCTGTGACAATccagcacagcttctccctgtgctCGGTTTAGAGACAATGGCAGAGGGCACCGGAGAGGGTCAGATGGAAGCTTTTTTGATTATAGGCACTTTTCATAAGCATATTTAACAGATACAATGCCACAAGTAGAAAGGTTTACAGTTTAACTGGCAAATGGACTCCTGAGTGTCTGGGCACATCTACTGACTTTCTCTTGAATGAAAAGGGAATAGGTACTGTTACTGTGTATACTGCTTGCCTATATCAGGAACTTGGTATTCCAATCGAGTCATTTGACTTATTACAGAAACCTGAGGTAGTTGATAGTCACGTGACAAAATGATTCTACCACTTGTAGGCTATGGTTGTATGGTTTTCATATGACTGCACCTTTACATTGATTTATTACAATAACAAATATGTACTTGTGTACAAGAGTGTACTTGTGTACAAAAATATTTATAACTTTGTCTCTAAAAGAGATTCCTCTGTCAAATGTTCAACTGAATCATTTGAAATGTTTGTGTATATATGTGCTTTAACTTATACCAGATGTTAATGTATTATTGGAAATTGACAAATGGACACAAAGAAAAGCatgttaaataaatgaaaatagCAGAATTTTAA

Function

NR:

description
dnaJ homolog subfamily B member 5-like

GO: NA

KEGG:

id description
K09511 DNAJB5; DnaJ homolog subfamily B member 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021601973.2 True 2342 mRNA 0.49 4 17153464 17158078

Neighbor

gene id symbol gene type direction distance location
hwa LOC106569438 coding downstream 3388 17147848 ~ 17150076 (-)
haus1 haus1 coding downstream 33523 17117368 ~ 17119941 (-)
LOC110523345 LOC106569410 coding downstream 44321 17092271 ~ 17109143 (-)
LOC110523346 rnf165 coding downstream 63427 17071595 ~ 17090037 (-)
LOC110523343 rl37 coding downstream 169961 16980916 ~ 16983503 (-)
LOC110523351 LOC106569451 coding upstream 3665 17161638 ~ 17179125 (-)
LOC110523354 LOC106569496 coding upstream 327818 17483696 ~ 17521507 (-)
nbc nbc coding upstream 440830 17598908 ~ 17688319 (-)
dck dck coding upstream 545842 17703920 ~ 17713895 (-)
LOC110523355 mol1a coding upstream 556571 17714649 ~ 17722603 (-)
G373240 NA non-coding downstream 1541 17151652 ~ 17151923 (-)
G373226 NA non-coding downstream 37928 17115322 ~ 17115536 (-)
G373225 NA non-coding downstream 38331 17114906 ~ 17115133 (-)
G373216 NA non-coding downstream 83449 17069630 ~ 17070015 (-)
G373285 NA non-coding upstream 73587 17231665 ~ 17231914 (-)
G373286 NA non-coding upstream 75333 17233411 ~ 17233628 (-)
G373288 NA non-coding upstream 76945 17235023 ~ 17235225 (-)
G373289 LOC105027273 non-coding upstream 77866 17235944 ~ 17239430 (-)
G373228 LOC106569424 other downstream 27657 17124037 ~ 17125807 (-)
LOC110523341 LOC106569324 other downstream 211273 16909582 ~ 16942359 (-)
G372123 NA other downstream 1172249 15978502 ~ 15981215 (-)
G372122 NA other downstream 1177348 15975606 ~ 15976116 (-)
LOC110523302 NA other downstream 1455135 15693396 ~ 15707607 (-)
G374189 NA other upstream 844742 18002820 ~ 18003170 (-)
G374786 NA other upstream 1400062 18558140 ~ 18559167 (-)
G377800 NA other upstream 3536018 20694096 ~ 20694708 (-)
G377809 LOC106568602 other upstream 3546535 20704613 ~ 20705140 (-)

Expression


Co-expression Network