Gene
RNA
| Item | Value |
|---|---|
| gene id | G373216 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 17069630 ~ 17070015 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU424317 | True | 386 | lncRNA | 0.39 | 1 | 17069630 | 17070015 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523343 | rl37 | coding | downstream | 86127 | 16980916 ~ 16983503 (-) |
| LOC118964776 | NA | coding | downstream | 87295 | 16982257 ~ 16982335 (-) |
| LOC110523341 | LOC106569324 | coding | downstream | 127271 | 16909582 ~ 16942359 (-) |
| sec14l7 | LOC106569318 | coding | downstream | 172752 | 16872284 ~ 16896878 (-) |
| LOC118964572 | LOC106569151 | coding | downstream | 200176 | 16792247 ~ 16869454 (-) |
| LOC110523346 | rnf165 | coding | upstream | 1580 | 17071595 ~ 17090037 (-) |
| LOC110523345 | LOC106569410 | coding | upstream | 22256 | 17092271 ~ 17109143 (-) |
| haus1 | haus1 | coding | upstream | 47353 | 17117368 ~ 17119941 (-) |
| hwa | LOC106569438 | coding | upstream | 77833 | 17147848 ~ 17150076 (-) |
| LOC110523350 | LOC106569446 | coding | upstream | 83449 | 17153464 ~ 17158078 (-) |
| G373213 | NA | non-coding | downstream | 5962 | 17063409 ~ 17063668 (-) |
| G373212 | NA | non-coding | downstream | 6972 | 17062359 ~ 17062658 (-) |
| G373209 | NA | non-coding | downstream | 13088 | 17056313 ~ 17056542 (-) |
| G373208 | NA | non-coding | downstream | 14468 | 17054883 ~ 17055162 (-) |
| G373196 | NA | non-coding | downstream | 27905 | 17041487 ~ 17041725 (-) |
| G373225 | NA | non-coding | upstream | 44891 | 17114906 ~ 17115133 (-) |
| G373226 | NA | non-coding | upstream | 45307 | 17115322 ~ 17115536 (-) |
| G373240 | NA | non-coding | upstream | 81637 | 17151652 ~ 17151923 (-) |
| LOC110523351 | LOC106569451 | non-coding | upstream | 91623 | 17161638 ~ 17179125 (-) |
| G372123 | NA | other | downstream | 1088415 | 15978502 ~ 15981215 (-) |
| G372122 | NA | other | downstream | 1093514 | 15975606 ~ 15976116 (-) |
| LOC110523302 | NA | other | downstream | 1371301 | 15693396 ~ 15707607 (-) |
| G371294 | LOC106569911 | other | downstream | 1944841 | 15123475 ~ 15124789 (-) |
| G373228 | LOC106569424 | other | upstream | 54022 | 17124037 ~ 17125807 (-) |
| LOC110523354 | LOC106569496 | other | upstream | 419011 | 17483696 ~ 17521507 (-) |
| G374189 | NA | other | upstream | 932805 | 18002820 ~ 18003170 (-) |
| G374786 | NA | other | upstream | 1488125 | 18558140 ~ 18559167 (-) |
| G377800 | NA | other | upstream | 3624081 | 20694096 ~ 20694708 (-) |
