XLOC_022854 (fbxo15)


Basic Information

Item Value
gene id XLOC_022854
gene name fbxo15
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 15655069 ~ 15669210 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045425
tactgatttaaattatcgcaactaaaaaaaaaaacctgttcaaATTGCACCAAGCTACTACACTCGCATGTAGATTTCAGGGTGTTTGTGTAACTTCTTTTCTGCTCCGGGTCTGCTGAGGGCAGTATTTCTCCAAATAGTTACTCGCAACACCTGACGGTAGAAGAAAGTTGTAGCAACAGCgcttttgttgtgttttcattGGAATGGCATGCTATTATATAACTATATGCTGTACTGGACATTGCGCTGCTTAGTGTTACAGACTGTACTCATTAAAACAGAGCAGACGCGGTGAGATGTGTCGCGCGATTAAAGTGCCTGGCACCTCGGACACGCGCGCTCTTCACTGGTTACCTTGACAGCGAGAGCCAGACCGAACACATAACAAATTAAGAGGCACTTAAACACGTTTCACAAGAGATACAAATTATGTCCTCGCTATCCGTGAAGACCCGCAGGGAAGATGTTGGGAAGCCCTTAGTTATTAAACCAAAAGCCATGTCCAGGTTGTGTGTTCGCACATATGCTTCTGTAACGTTACAACAGAGCTAGCGAATATGGTTTGAATGATGTCATgatcttttgattttttttttttcagcagacaCAGGCTTACGGCTTCACAACACTTTCCAGTCTACAAAAAGACATCTAAATGTACAGGAAAACATAATAGAAACTCCCTGGACAGGATGCCACCAGAGATCATTCTCAAGATTCTGTTATACTTGGATGCTGGTTCTCTTTTCTGCATTAGTTTTGTCAACAAGCTCTTCCATGATCTATCCAACAGCAATGCTCTGTGGTATCAGTTTTATACCCGTGAACTCATCAAAAAGAAGCAAGGCTGCCAAAAAGTCCAGGCGACACATGGTCGACATAGTGTTGAAGTTGTTCAGGAGAAGCCAAAGGGATACTGGAGAAATGCTTTCTTCAAAGAAATCACAGGATTGAATACGAACAAGTGGAGCAAAAAACTTCAGCGCATCAACCCCTATTCAGGACTACCGTGTCATACAGAGGAAGTTCTAagGAGTCTGTGCGTTTCATGGCAGATCACAGTGACTGATGGGAGAGGACGGCGCAGCACCTTTGAGCAGTCTCATGTCTCCTTCAGCAGCACGGCTGGGTTTGTGTTTTGGGGCGCTGTCAACTGGCCTCCCTTCAACCACATCACCTCTGTTGAGGTTCACGGTGTGGCGCTGGTGCCCCTCGATTGTCCTGCTGCCTACAGGCCGGGATGGAAATCTGTTATGGCCAAGGTAAAGGTTCAAGGTGAATGCAGTGAGCTGTTTGTTTCGGACAAGGTTATCAAGATGGTGTATGTTGGACAAGGCATAACTTTTGGACTCTGgaagGACCAATTGCAAATTGCTTTTGTCATTGTGAACTTGCACAATCACTTACTTGTGCAAAGAAGTCTTCACTCATCCATTAGTTCACATAGAGAAGCCAGAGTCAGGGCTTTGTTTGATGACGTGGATTCAGAGTTTGGTCTTCATGGATACACTGCTTACATTGAACTACACAACACAGCCAGAGTCCTCATGTCTGACCGCTTTTCACAGCTCTTCTGCAGGAGAGACCATATTTCTGGTGGTTTTCTTCCATTGAAACTGATTGGTGAAAATAACAGATGCCCAAGTGCTCATCTGCTTAGTGATGTCAGCTTGCCTTGGAAAACTGAGGCTTTACATGGATTTATCAAGGACTGCTGCATGATCAGCCTCACTGTATGGGACGAAGCCAAACAGCCTTTTTGGTGTGTCAGCGCTCCTGTTGTCATTACGAAAGTCAATCAGGACACTGTATCATATGGTTTTGATGGTGCAAGTTTTTCCATCCTCTACCAAGACTCAGAGGGGAGGGTGGAGATGAGGCTGAAGCAGATGGAGTATAAGGAACAGTATTTTGTGGTTAATCTAGTGATTTACATTTCTGTTGCCAAAGTGAATAAGCACTTTGGGAGAGATTACTGA
>TCONS_00045424
tactgatttaaattatcgcaactaaaaaaaaaaacctgttcaaATTGCACCAAGCTACTACACTCGCATGTAGATTTCAGGGTGTTTGTGTAACTTCTTTTCTGCTCCGGGTCTGCTGAGGGCAGTATTTCTCCAAATAGTTACTCGCAACACCTGACGGTAGAAGAAAGTTGTAGCAACAGCgcttttgttgtgttttcattGGAATGGCATGCTATTATATAACTATATGCTGTACTGGACATTGCGCTGCTTAGTGTTACAGACTGTACTCATTAAAACAGAGCAGACGCGGTGAGATGTGTCGCGCGATTAAAGTGCCTGGCACCTCGGACACGCGCGCTCTTCACTGGTTACCTTGACAGCGAGAGCCAGACCGAACACATAACAAATTAAGAGGCACTTAAACACGTTTCACAAGAGATACAAATTATGTCCTCGCTATCCGTGAAGACCCGCAGGGAAGATGTTGGGAAGCCCTTAGTTATTAAACCAAAAGCCATGTCCAGcagacaCAGGCTTACGGCTTCACAACACTTTCCAGTCTACAAAAAGACATCTAAATGTACAGGAAAACATAATAGAAACTCCCTGGACAGGATGCCACCAGAGATCATTCTCAAGATTCTGTTATACTTGGATGCTGGTTCTCTTTTCTGCATTAGTTTTGTCAACAAGCTCTTCCATGATCTATCCAACAGCAATGCTCTGTGGTATCAGTTTTATACCCGTGAACTCATCAAAAAGAAGCAAGGCTGCCAAAAAGTCCAGGCGACACATGGTCGACATAGTGTTGAAGTTGTTCAGGAGAAGCCAAAGGGATACTGGAGAAATGCTTTCTTCAAAGAAATCACAGGATTGAATACGAACAAGTGGAGCAAAAAACTTCAGCGCATCAACCCCTATTCAGGACTACCGTGTCATACAGAGGAAGTTCTAagGAGTCTGTGCGTTTCATGGCAGATCACAGTGACTGATGGGAGAGGACGGCGCAGCACCTTTGAGCAGTCTCATGTCTCCTTCAGCAGCACGGCTGGGTTTGTGTTTTGGGGCGCTGTCAACTGGCCTCCCTTCAACCACATCACCTCTGTTGAGGTTCACGGTGTGGCGCTGGTGCCCCTCGATTGTCCTGCTGCCTACAGGCCGGGATGGAAATCTGTTATGGCCAAGGTAAAGGTTCAAGGTGAATGCAGTGAGCTGTTTGTTTCGGACAAGGTTATCAAGATGGTGTATGTTGGACAAGGCATAACTTTTGGACTCTGgaagGACCAATTGCAAATTGCTTTTGTCATTGTGAACTTGCACAATCACTTACTTGTGCAAAGAAGTCTTCACTCATCCATTAGTTCACATAGAGAAGCCAGAGTCAGGGCTTTGTTTGATGACGTGGATTCAGAGTTTGGTCTTCATGGATACACTGCTTACATTGAACTACACAACACAGCCAGAGTCCTCATGTCTGACCGCTTTTCACAGCTCTTCTGCAGGAGAGACCATATTTCTGGTGGTTTTCTTCCATTGAAACTGATTGGTGAAAATAACAGATGCCCAAGTGCTCATCTGCTTAGTGATGTCAGCTTGCCTTGGAAAACTGAGGCTTTACATGGATTTATCAAGGACTGCTGCATGATCAGCCTCACTGTATGGGACGAAGCCAAACAGCCTTTTTGGTGTGTCAGCGCTCCTGTTGTCATTACGAAAGTCAATCAGGACACTGTATCATATGGTTTTGATGGTGCAAGTTTTTCCATCCTCTACCAAGACTCAGAGGGGAGGGTGGAGATGAGGCTGAAGCAGATGGAGTATAAGGAACAGTATTTTGTGGTTAATCTAGTGATTTACATTTCTGTTGCCAAAGTGAATAAGCACTTTGGGAGAGATTACTGA
>TCONS_00045426
AGAAAGTTGTAGCAACAGCgcttttgttgtgttttcattGGAATGGCATGCTATTATATAACTATATGCTGTACTGGACATTGCGCTGCTTAGTGTTACAGACTGTACTCATTAAAACAGAGCAGACGCGGTGAGATGTGTCGCGCGATTAAAGTGCCTGGCACCTCGGACACGCGCGCTCTTCACTGGTTACCTTGACAGCGAGAGCCAGACCGAACACATAACAAATTAAGAGGCACTTAAACACGTTTCACAAGAGATACAAATTATGTCCTCGCTATCCGTGAAGACCCGCAGGGAAGATGTTGGGAAGCCCTTAGTTATTAAACCAAAAGCCATGTCCAGacaCAGGCTTACGGCTTCACAACACTTTCCAGTCTACAAAAAGACATCTAAATGTACAGGAAAACATAATAGAAACTCCCTGGACAGGATGCCACCAGAGATCATTCTCAAGATTCTGTTATACTTGGATGCTGGTTCTCTTTTCTGCATTAGTTTTGTCAACAAGCTCTTCCATGATCTATCCAACAGCAATGCTCTGTGGTATCAGTTTTATACCCGTGAACTCATCAAAAAGAAGCAAGGCTGCCAAAAAGTCCAGGCGACACATGGTCGACATAGTGTTGAAGTTGTTCAGGAGAAGCCAAAGGGATACTGGAGAAATGCTTTCTTCAAAGAAATCACAGGATTGAATACGAACAAGTGGAGCAAAAAACTTCAGCGCATCAACCCCTATTCAGGACTACCGTGTCATACAGAGGAAGTTCTAagGAGTCTGTGCGTTTCATGGCAGATCACAGTGACTGATGGGAGAGGACGGCGCAGCACCTTTGAGCAGTCTCATGTCTCCTTCAGCAGCACGGCTGGGTTTGTGTTTTGGGGCGCTGTCAACTGGCCTCCCTTCAACCACATCACCTCTGTTGAGGTTCACGGTGTGGCGCTGGTGCCCCTCGATTGTCCTGCTGCCTACAGGCCGGGATGGAAATCTGTTATGGCCAAGGTAAAGGTTCAAGGTGAATGCAGTGAGCTGTTTGTTTCGGACAAGGTTATCAAGATGGTGTATGTTGGACAAGGCATAACTTTTGGACTCTGgaagGACCAATTGCAAATTGCTTTTGTCATTGTGAACTTGCACAATCACTTACTTGTGCAAAGAAGTCTTCACTCATCCATTAGTTCACATAGAGAAGCCAGAGTCAGGGCTTTGTTTGATGACGTGGATTCAGAGTTTGGTCTTCATGGATACACTGCTTACATTGAACTACACAACACAGCCAGAGTCCTCATGTCTGACCGCTTTTCACAGCTCTTCTGCAGGAGAGACCATATTTCTGGTGGTTTTCTTCCATTGAAACTGATTGGTGAAAATAACAGATGCCCAAGTGCTCATCTGCTTAGTGATGTCAGCTTGCCTTGGAAAACTGAGGCTTTACATGGATTTATCAAGGACTGCTGCATGATCAGCCTCACTGTATGGGACGAAGCCAAACAGCCTTTTTGGTGTGTCAGCGCTCCTGTTGTCATTACGAAAGTCAATCAGGACACTGTATCATATGGTTTTGATGGTGCAAGTTTTTCCATCCTCTACCAAGACTCAGAGGGGAGGGTGGAGATGAGGCTGAAGCAGATGGAGTATAAGGAACAGTATTTTGTGGTTAATCTAGTGATTTACATTTCTGTTGCCAAAGTGAATAAGCACTTTGGGAGAGATTACTGAAGACTTTTTAATGTATTAGACACTTAAATCCACATTTTCACATAGCATTATGTTTTAATCACAGGTCAATCTGTCACAGAGATGAGGGATTGCCATGTCCCAATTTACTTATAAGTtgtatataacaaaaaataaagtcagGTTTTCCCACTCT

Function

symbol description
fbxo15 Orthologous to human FBXO15 (F-box protein 15).

GO: NA

KEGG:

id description
ko04121 Ubiquitin system

ZFIN:

id description
ZDB-GENE-080416-4 Orthologous to human FBXO15 (F-box protein 15).

Ensembl:

ensembl_id ENSDARG00000016897

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045425 False 1982 mRNA 0.44 9 15655069 15669056
TCONS_00045424 False 1887 mRNA 0.45 10 15655069 15669056
TCONS_00045426 True 1874 mRNA 0.44 10 15655233 15669210

Neighbor

gene id symbol gene type direction distance location
XLOC_022853 BX640518.1 coding upstream 241964 15412989 ~ 15413105 (+)
XLOC_022852 socs6a coding upstream 376294 15277216 ~ 15278775 (+)
XLOC_022851 dok6 coding upstream 547739 14937205 ~ 15107330 (+)
XLOC_022850 crispld1a coding upstream 769715 14859238 ~ 14885354 (+)
XLOC_022849 pi15a coding upstream 844435 14801844 ~ 14810634 (+)
XLOC_022855 CU929414.1 coding downstream 803 15670013 ~ 15671038 (+)
XLOC_022856 neto1l coding downstream 228507 15897717 ~ 16136685 (+)
XLOC_022857 TIMM21 coding downstream 471213 16140423 ~ 16147705 (+)
XLOC_022858 si:dkey-118j18.2 coding downstream 480041 16149251 ~ 16164758 (+)
XLOC_022859 NA coding downstream 497555 16166765 ~ 16194730 (+)
XLOC_022846 BX294113.1 non-coding upstream 1018766 14623831 ~ 14636303 (+)
XLOC_022847 BX294113.3 non-coding upstream 1019650 14635303 ~ 14635419 (+)
XLOC_022845 NA non-coding upstream 1069260 14582244 ~ 14585809 (+)
XLOC_022840 BX248495.1 non-coding upstream 1304049 14350900 ~ 14351020 (+)
XLOC_022860 BX005275.2 non-coding downstream 504989 16174199 ~ 16177300 (+)
XLOC_022861 BX005275.1 non-coding downstream 538352 16207562 ~ 16209000 (+)
XLOC_022863 NA non-coding downstream 1050396 16719606 ~ 16901861 (+)
XLOC_022864 BX004771.1 non-coding downstream 1138311 16807521 ~ 16807648 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_01588236_01598892 NA coding CI01000018 null 1588033 ~ 1599250 (+)