XLOC_022850 (crispld1a)


Basic Information

Item Value
gene id XLOC_022850
gene name crispld1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 14859238 ~ 14885354 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045417
ACGTAATCATCGCATCATCATCAGAGCTCATCCATCATGGGTCACTACACCTTTGCATTACCGACAGGGCTTTTTCTTCTTCTGGTGACCCGGACTGTGTTTGCCATGGTGTTGTTTAATGCCACAGATCTCGGCTTTCTTTTGGAGAAGTACCTGGAggatgatgctgatgatgatgcTGGTGACAGAGTGATGGAGCGACAGAGAGGCAAGAGAGCGATCACTGCCAGTGACATGCAGGCCATCTTGGACCTTCACAACAAACTCAGAGGACAAGTTTACCCACCGGCTTCAAATATGGAGTACATGGTGTGGGACAATGAACTGGAGCGGAGTGCTGAGGAATGGGCCGAGACCTGCCTCTGGGAGCATGGACCAGCAGGCCTGCTGCCTCAGATTGGTCAGAACCTCGGAGTTCACTGGGGAAGGTATCGACCACCTACTTCTCATGTACAAGCCTGGTACGATGAAGTCAAAGACTACTCATTTCCATACCCCCAAGAATGTAACCCTCACTGCCCTTTTAGGTGCAGTGGTCCAGTTTGCACCCACTACACTCAGCTTGTTTGGGCAACAAGTAGTCGAATTGGCTGTGCGATCAATGTGTGCTACAACATGAATGTGTGGGGCCAGATCTGGGCAAAAGCTGTTTATCTTGTGTGCAACTACTCACCAAAAGGTAACTGGTGGGGATATGCCCCATATAAACACGGCACCTCTTGCTCTGCGTGTCCACCAAGCTATGGAGGAGTGTGCAGAGAAAACCTCTGTTATAAAGGTGATGGAAAAAATAGGCAAAGCCCAAGTGAGGAAACACATGAAAGAAATTCAATAGAACCAGAGGCCCCTCACAGCCCTGGGCCCCGTTTACGGCCCCCAAGTCCAACCAGACACCCAAATGCAGTTGTGAGCAAAGAACAGATGTCCCAGACTGTGACATGTGACACAAAGCTAAGAGACCAGTGTAAAGGCACCACATGCAATAGgtaCGAGTGTCCGGCTGGTTGTTTGGACAGCATGGTGAAAGTGGTTGGAACTGTATATTATGACATGCAATCCAGTATTTGCCGGGCAGGCATTCATTACGGTGTCATTGACAATGATGGAGGCTGGGTGGATGTCACAAGACAGGGCAGAAAAGACTTctttattaaatcatataaaaatgGACTTCAGTCCCATGGAAAGTACCAGAGTGCAAATGCCTTCACAGTATCAAAAGTTACGGTGAAAGTAATCACTTGTGACACTACAGTGTCAGTGCTGTGTCCTTACCAAAAGCCTGCAAGACACTGTCCAAGGATTTACTGTCCTCGAAACTGCTTGGAAGAAAACTCCCAGCTTTCTCGAGTCATTGGCACCAGAATTTATTCAGATAAATCTAGTATATGCAGGTCTGCAATCCATGCTGGTGTTGTAAGCAATGAGTCAGGTGGTTACATCGATGTGATGCCCACAGACAACAGGAAGCTGTACACTTCTTCATACCAGAATGGCATAGTCTCAGAAAGCCTACAGAACCCAGCGGGAGGAAAGGCATTCAGAGTATTCGCAGTTATTTGA
>TCONS_00045418
ATGGGTCACTACACCTTTGCATTACCGACAGGGCTTTTTCTTCTTCTGGTGACCCGGACTGTGTTTGCCATGGTGTTGTTTAATGCCACAGATCTCGGCTTTCTTTTGGAGAAGTACCTGGAggatgatgctgatgatgatgcTGGTGACAGAGTGATGGAGCGACAGAGAGGCAAGAGAGCGATCACTGCCAGTGACATGCAGGCCATCTTGGACCTTCACAACAAACTCAGAGGACAAGTTTACCCACCGGCTTCAAATATGGAGTACATGGTGTGGGACAATGAACTGGAGCGGAGTGCTGAGGAATGGGCCGAGACCTGCCTCTGGGAGCATGGACCAGCAGGCCTGCTGCCTCAGATTGGTCAGAACCTCGGAGTTCACTGGGGAAGGTATCGACCACCTACTTCTCATGTACAAGCCTGGTACGATGAAGTCAAAGACTACTCATTTCCATACCCCCAAGAATGTAACCCTCACTGCCCTTTTAGGTGCAGTGGTCCAGTTTGCACCCACTACACTCAGCTTGTTTGGGCAACAAGTAGTCGAATTGGCTGTGCGATCAATGTGTGCTACAACATGAATGTGTGGGGCCAGATCTGGGCAAAAGCTGTTTATCTTGTGTGCAACTACTCACCAAAAGGTAACTGGTGGGGATATGCCCCATATAAACACGGCACCTCTTGCTCTGCGTGTCCACCAAGCTATGGAGGAGTGTGCAGAGAAAACCTCTGTTATAAAGCCCAGACTGTGACATGTGACACAAAGCTAAGAGACCAGTGTAAAGGCACCACATGCAATAGgtaCGAGTGTCCGGCTGGTTGTTTGGACAGCATGGTGAAAGTGGTTGGAACTGTATATTATGACATGCAATCCAGTATTTGCCGGGCAGGCATTCATTACGGTGTCATTGACAATGATGGAGGCTGGGTGGATGTCACAAGACAGGGCAGAAAAGACTTctttattaaatcatataaaaatgGACTTCAGTCCCATGGAAAGTACCAGAGTGCAAATGCCTTCACAGTATCAAAAGTTACGGTGAAAGTAATCACTTGTGACACTACAGTGTCAGTGCTGTGTCCTTACCAAAAGCCTGCAAGACACTGTCCAAGGATTTACTGTCCTCGAAACTGCTTGGAAGAAAACTCCCAGCTTTCTCGAGTCATTGGCACCAGAATTTATTCAGATAAATCTAGTATATGCAGGTCTGCAATCCATGCTGGTGTTGTAAGCAATGAGTCAGGTGGTTACATCGATGTGATGCCCACAGACAACAGGAAGCTGTACACTTCTTCATACCAGAATGGCATAGTCTCAGAAAGCCTACAGAACCCAGCGGGAGGAAAGGCATTCAGAGTATTCGCAGTTATTTGAGCATGTGCTGAAGTCACGGTCACTCATCAACCTGTTCTGTTGATTAGGCTGTAATACTGGCCATTAAGAGGCTTTTTTCACTCTAACCAGCCTGTATTTCCTTACACACAAATGTTGAATGAAGTAGGTATTTGCTGTATAGATGGAAACCCTTTCCAGTGCTGATTACCCATTTTATTGGTTGAAATGTATGTGATTAAGGGATGATTCAGGGAATGAGGTGTCTGTTTTGCAGAGAAAAAGCACTTAAGGATTTTTTATCTTGCCTTATTTTCATTTCAGAACTTTTGTAGTGTATCTATGATATATTTTAGTTTCATTACATGTTGGGGAAGTTCTCATTCATTTATAGTttcgttattattttttttataactgtatttatttttttatatattgcttTAAGGCAAGAAAAGACTGCTGATAAGGTTTTGTTAAAGTTTTTGCAGATTACTTTGATGATAATGAAGAATGTGGATAATCCTGCAGGGCAGGAGATTACATCTAAATTTCAagaacatcagaaaaaaaacttGTATGAAACGTCCACATTATTAAACACTGTAAATAGCTTGTCGTGAAAAGCTTGTCTATAGtattaatagggtatatgctgaattGAAAAACttttcagtaacctgggtcaagcgctTCCAGTTGCCAGTATGCCGTTACAAAATCAGCAcgtttaaaggtgctgttggtGATTGTGTTCAGAATaagttttgttgtgctggttgaaagtctcttcacattccaatagtactgtttaaagtaaatgatctaaatgtatgtatgtgtatttttatat

Function

symbol description
crispld1a Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CRISPLD1 (cysteine rich secretory protein LCCL domain containing 1).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-090612-1 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CRISPLD1 (cysteine rich secretory protein LCCL domain containing 1).

Ensembl:

ensembl_id ENSDARG00000077275

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045417 False 1563 mRNA 0.48 14 14859238 14884543
TCONS_00045418 True 2191 mRNA 0.42 13 14859274 14885354

Neighbor

gene id symbol gene type direction distance location
XLOC_022849 pi15a coding upstream 48604 14801844 ~ 14810634 (+)
XLOC_022848 gdap1 coding upstream 133475 14713776 ~ 14725763 (+)
XLOC_022846 BX294113.1 coding upstream 222935 14623831 ~ 14636303 (+)
XLOC_022847 BX294113.3 coding upstream 223819 14635303 ~ 14635419 (+)
XLOC_022844 thtpa coding upstream 257458 14581864 ~ 14601780 (+)
XLOC_022851 dok6 coding downstream 51851 14937205 ~ 15107330 (+)
XLOC_022852 socs6a coding downstream 391862 15277216 ~ 15278775 (+)
XLOC_022853 BX640518.1 coding downstream 527635 15412989 ~ 15413105 (+)
XLOC_022854 fbxo15 coding downstream 769715 15655069 ~ 15669210 (+)
XLOC_022855 CU929414.1 coding downstream 784659 15670013 ~ 15671038 (+)
XLOC_022845 NA non-coding upstream 273429 14582244 ~ 14585809 (+)
XLOC_022840 BX248495.1 non-coding upstream 508218 14350900 ~ 14351020 (+)
XLOC_022837 NA non-coding upstream 780602 14055096 ~ 14078636 (+)
XLOC_022859 NA non-coding downstream 1281411 16166765 ~ 16194730 (+)
XLOC_022860 BX005275.2 non-coding downstream 1288845 16174199 ~ 16177300 (+)
XLOC_022861 BX005275.1 non-coding downstream 1322208 16207562 ~ 16209000 (+)
XLOC_022863 NA non-coding downstream 1834252 16719606 ~ 16901861 (+)

Expression


Co-expression Network