XLOC_022844 (thtpa)


Basic Information

Item Value
gene id XLOC_022844
gene name thtpa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 14581864 ~ 14601780 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045408
ATTTTGGAACCATATCTGCACAACCTTTAGTGGAAGCCCAAGCTCTGTTCCGACTGCCTCACACTCCAGTGCATTAGGATGAGCACACGTCTCATAGCAGGACTGCAGGATGGACAGCTGAAGACTGGTTAGTACCAAAATGACTGTAGAAGTGGAAAGAAAATTCGTGTGTGATGCAGAAATTATGAGGAAACTACAGGATATTGGAgCCGAATGCGTTGGTGAGCGAGAGTTTGGAGACCAGTACTTTGACTCTCCAGATTTCCTTCTCACGCTGAAGGATTTCTGGCTGAGATGCAGAGACGGACAGTGGGAGTTGAAAAGCCCTGCAGTTTCAGAAGCTCCAGCTGAGACGCTCTGCACTCGATACAGAGAGATAACCAGCCTGCCTGTGATTCAATCAGAAGTCAGCAAGATTATCAGAGAATCAAACTGCTCACAAAGGAAACAAATTGGCCAAACTGAGGACACGCCGATCTGTTCGACAGGA
>TCONS_00045409
caatttacaataataatcattagattatttacattgttacattatttagataattaaaatagaaaaagccaacaaaaatcaaataaaagtcaAACTATAATAAAGAGATAACAATAGGTCATCTGATCTGATGATAGACATATACTAGAGAAGAAACTGAGTGAAAGGGGCATTCGTCAGGAAGTACTACGTTATATGTGTTGCGCTGCTGCCCGAAAATGTGCCTGACTAGAAAAACTGCAGAGGACCCTGATTCCCCGTCTGCCCTCATTACACTGATTGATCGGTAAGGTTTGTACAGTCTGTTTGATATTATGTTGTCGTGACTGTTCCAACCGTGTTTTATCTGCAGTTGTAGTTACGGTATAATTACCACTGTCTGAAGTAAACCATTTATGAACATGCCACCGGGTTTTTTGCTCTTTTCTGTCTTAAAACATAACGAGGTTCCTACAGAGACTAATGTTATTATCTTTTGCTCTATTTTTAAGTACTATACTTTTAACGTTACGTCTTTACTAATAAACAATACTGATAAACACTCTACAAAGTACTTtgctaaattattattgttcattttgttctgttttgcagAAAGTCACTGGTTTACATGGGAATTTTAATTGTGTCTTGGTGTTTTTTATATCCCAGTACCAAAATGACTGTAGAAGTGGAAAGAAAATTCGTGTGTGATGCAGAAATTATGAGGAAACTACAGGATATTGGAgCCGAATGCGTTGGTGAGCGAGAGTTTGGAGACCAGTACTTTGACTCTCCAGATTTCCTTCTCACGCTGAAGGATTTCTGGCTGAGATGCAGAGACGGACAGTGGGAGTTGAAAAGCCCTGCAGTTTCAGAAGCTCCAGCTGAGACGCTCTGCACTCGATACAGAGAGATAACCAGCCTGCCTGTGATTCAATCAGAAGTCAGCAAGATTATCAGAGAATCAAACTGCTCACAAAGGAAACAAATTGGCCAAACTGAGGACACGCCGATCTGTTCGACAGGAGACACAAAGTGGCTGAATGAGCTCGGTCTGGTGTGTTTTGCTGAGTTTAGGACTCAGCGTTGCTCTTATGTGCTGGAGAGGGAGGACGGAGCGGTGCGGGTGGATCTGGACCGGGCTGATTTCGGTTATTGTGTGGGGGAAATTGAGGTGTTGGTGCCTGAAGGAGGAGACGTgaatgcagctctgcagagtaTTACAAGCATTGCTGAACAGCTggGTTTGAACTCTGAGAAGAAAGTAAAGGGAAAAATGGATGTTTTTCTTCAAAGAAATCGACCAGATCATTACAACAAACTTCTTAGTGCTCATATTTTATGAGGTAGCTCTTTTGTAACATTGAAAGTTTTTAACTGATTAAGTTATGGAAACTTGCACTAATGCTCATATTTTCATGAGCAAGTAATATCTGTTAATATAATGTATGGCGTGATAATAATAAATTTGCTCTGGTCTTGTCAAAGGGAAATACACATAAAAACAGGCAACAAAAGGTATAGTTTGTGACATTATGATGTTTGTGGTTATTGCCAAATAAAGCAGGTATCTGACATGGTTTGTTTTTGGCAATTGTTTGAGAGGGTGTTTTTATGCTCCTGTTACATCACTGTGAggtatttatgtttgtttatctaACAAATATGGACTTGCTTTTAAGAGCCAGTTGATTTGATTACATTAGAAATTGCAAAATGTTAAGTTTAAATATCCATGGGAAACATTGTTTTAGTAAATGTTCAgtgatttgcatacatttcttgcACAAAAATGTAGTCGGGTTCAACATTTGTGTTGaatatttttcaggtttttaaagaagattattgtttatttaatatttatttatttttaaagttataattAGTGTTTAACAAGACCATACATAGTAGGTATACAATACAACATAGGAAAAATTAGACTGTCtttttcttattttcccactatcaccccaaaataaaataaacataatttataaataaaaaaaacatatcctctaaaagaaaaaaaaaattaaaatagtttttttgttaatacatttttttcagtttttatagaATAAATATGCTATGATCAAGCAATTTAATGTTGGAGGGGAAATTTATAACTCATTGCAGAAGGAAAGCTCATTTTGAGAGAACtaccttttaaaatatgttttgtaacaactttaaaaaggaaaaagtgcaaaaaaaaaaaggaaaatagttTCACCATTTACAACTACATGTATCGtctcactttatttttaaaatattagctggggaaatgtttatttaaggttaaaaaaaaatcatgtattttatgaaaatatgaAATGTAACAGTGTGTATAATAGTAGTTTCTAACTTTCAGCATTGACCAGAGCAGATTGTCTTTGGGATTCAGTGTTTGTTCAGCAGAGGGCGCAGTTCACTTTCTCTTCAGCTGTTCTCTCAGTCATCCTGCAGAGGGCGCTGTGTTCCTGAAAAATCATTTGCAAGATCATTATTACAGTCGGCTTTCACGCCAGCTGTTGGGTAACTACTGAAACCAAGTAGAAATGATTAGAATAATCTTTATTCATCAGTGTGATGAGTTATAATCAGTTGATTAATCAGATCAGTTATTTCAGTATTGTATATCATTATGTGGTGGATGCACATTTTCATTCAGAAATGTTTGTGCATgaaattgttaatatttaattttaataaaaactgaaatattaggctaaaaaacataaataataaaaatgcaagcttaatattgttatatttaataaaaaaaatatataatagttttaaatatgaaattataaatatgaaaatcGTACAAGATGGTGTAATTGAAATGTTTTGGATACAGTTTTTTTAACATCACTTGTTAGATCTTTATTAAGCACtacaatgattaaaaaaaaatttgttatacaataaatgtaaaactgcaaTGATTTGATACAGAAAGTGcttaaaatatgaacatatatATAGTGAAttacaaattatgaaaataatgtaTTATATGTACTAAACAATGtattatatgtattaatatttattgttttgtattataattatatgtcaattaaaaat
>TCONS_00045410
GTGCCTGACTAGAAAAACTGCAGAGGACCCTGATTCCCCGTCTGCCCTCATTACACTGATTGATCGGTAAGTACCAAAATGACTGTAGAAGTGGAAAGAAAATTCGTGTGTGATGCAGAAATTATGAGGAAACTACAGGATATTGGAgCCGAATGCGTTGGTGAGCGAGAGTTTGGAGACCAGTACTTTGACTCTCCAGATTTCCTTCTCACGCTGAAGGATTTCTGGCTGAGATGCAGAGACGGACAGTGGGAGTTGAAAAGCCCTGCAGTTTCAGAAGCTCCAGCTGAGACGCTCTGCACTCGATACAGAGAGATAACCAGCCTGCCTGTGATTCAATCAGAAGTCAGCAAGATTATCAGAGAATCAAACTGCTCACAAAGGAAACAAATTGGCCAAACTGAGGACACGCCGATCTGTTCGACAGGAGACACAAAGTGGCTGAATGAGCTCGGTCTGGTGTGTTTTGCTGAGTTTAGGACTCAGCGTTGCTCTTATGTGCTGGAGAGGGAGGACGGAGCGGTGCGGGTGGATCTGGACCGGGCTGATTTCGGTTATTGTGTGGGGGAAATTGAGGTGTTGGTGCCTGAAGGAGGAGACGTgaatgcagctctgcagagtaTTACAAGCATTGCTGAACAGCTggGTTTGAACTCTGAGAAGAAAGTAAAGGGAAAAATGGATGTTTTTCTTCAAAGAAATCGACCAGATCATTACAACAAACTTCTTAGTGCTCATATTTTATGAGGTAGCTCTTTTGTAACATTGAAAGTTTTTAACTGATTAAGTTATGGAAACTTGCACTAATGCTCATATTTTCATGAGCAAGTAATATCTGTTAATATAATGTATGGCGTGATAATAATAAATTTGCTCTGGTCTTGTCAAAGGGAAATACACATAAAAACAGGCAACAAAAGGTATAGTTTGTGACATTAT
>TCONS_00045411
GTGCCTGACTAGAAAAACTGCAGAGGACCCTGATTCCCCGTCTGCCCTCATTACACTGATTGATCGTACCAAAATGACTGTAGAAGTGGAAAGAAAATTCGTGTGTGATGCAGAAATTATGAGGAAACTACAGGATATTGGAgCCGAATGCGTTGGTGAGCGAGAGTTTGGAGACCAGTACTTTGACTCTCCAGATTTCCTTCTCACGCTGAAGGATTTCTGGCTGAGATGCAGAGACGGACAGTGGGAGTTGAAAAGCCCTGCAGTTTCAGAAGCTCCAGCTGAGACGCTCTGCACTCGATACAGAGAGATAACCAGCCTGCCTGTGATTCAATCAGAAGTCAGCAAGATTATCAGAGAATCAAACTGCTCACAAAGGAAACAAATTGGCCAAACTGAGGACACGCCGATCTGTTCGACAGGAGACACAAAGTGGCTGAATGAGCTCGGTCTGGTGTGTTTTGCTGAGTTTAGGACTCAGCGTTGCTCTTATGTGCTGGAGAGGGAGGACGGAGCGGTGCGGGTGGATCTGGACCGGGCTGATTTCGGTTATTGTGTGGGGGAAATTGAGGTGTTGGTGCCTGAAGGAGGAGACGTgaatgcagctctgcagagtaTTACAAGCATTGCTGAACAGCTggGTTTGAACTCTGAGAAGAAAGTAAAGGGAAAAATGGATGTTTTTCTTCAAAGAAATCGACCAGATCATTACAACAAACTTCTTAGTGCTCATATTTTATGAGGTAGCTCTTTTGTAACATTGAAAGTTTTTAACTGATTAAGTTATGGAAACTTGCACTAATGCTCATATTTTCATGAGCAAGTAATATCTGTTAATATAATGTATGGCGTGATAATAATAAATTTGCTCTGGTCTTGTCAAAGGGAAATACACATAAAAACAGGCAACAAAAGGTATAGTTTGTGACATTATGATGTTTGTGGTTATTGCCAAATAAAGCAGGTATCTGA
>TCONS_00045412
GTCTGCCCTCATTACACTGATTGATCGAAAGTCACTGGTTTACATGGGAATTTTAATTGTGTCTTGGTGTTTTTTATATCCCAGTACCAAAATGACTGTAGAAGTGGAAAGAAAATTCGTGTGTGATGCAGAAATTATGAGGAAACTACAGGATATTGGAgCCGAATGCGTTGGTGAGCGAGAGTTTGGAGACCAGTACTTTGACTCTCCAGATTTCCTTCTCACGCTGAAGGATTTCTGGCTGAGATGCAGAGACGGACAGTGGGAGTTGAAAAGCCCTGCAGTTTCAGAAGCTCCAGCTGAGACGCTCTGCACTCGATACAGAGAGATAACCAGCCTGCCTGTGATTCAATCAGAAGTCAGCAAGATTATCAGAGAATCAAACTGCTCACAAAGGAAACAAATTGGCCAAACTGAGGACACGCCGATCTGTTCGACAGGAGACACAAAGTGGCTGAATGAGCTCGGTCTGGTGTGTTTTGCTGAGTTTAGGACTCAGCGTTGCTCTTATGTGCTGGAGAGGGAGGACGGAGCGGTGCGGGTGGATCTGGACCGGGCTGATTTCGGTTATTGTGTGGGGGAAATTGAGGTGTTGGTGCCTGAAGGAGGAGACGTgaatgcagctctgcagagtaTTACAAGCATTGCTGAACAGCTggGTTTGAACTCTGAGAAGAAAGTAAAGGGAAAAATGGATGTTTTTCTTCAAAGAAATCGACCAGATCATTACAACAAACTTCTTAGTGCTCATATTTTATGAGGTAGCTCTTTTGTAACATTGAAAGTTTTTAACTGATTAAGTTATGGAAACTTGCACTAATGCTCATATTTTCATGAGCAAGTAATATCTGTTAATATAATGTATGGC

Function

symbol description
thtpa Enables thiamin-triphosphatase activity. Predicted to be involved in dephosphorylation and thiamine diphosphate metabolic process. Predicted to act upstream of or within thiamine metabolic process. Predicted to be located in cytoplasm. Orthologous to human THTPA (thiamine triphosphatase).

GO:

id name namespace
GO:0006772 thiamine metabolic process biological_process
GO:0016311 dephosphorylation biological_process
GO:0042357 thiamine diphosphate metabolic process biological_process
GO:0050333 thiamin-triphosphatase activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
ko00730 Thiamine metabolism

ZFIN:

id description
ZDB-GENE-070502-2 Enables thiamin-triphosphatase activity. Predicted to be involved in dephosphorylation and thiamine diphosphate metabolic process. Predicted to act upstream of or within thiamine metabolic process. Predicted to be located in cytoplasm. Orthologous to human THTPA (thiamine triphosphatase).

Ensembl:

ensembl_id ENSDARG00000063049

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045408 False 490 mRNA 0.47 3 14581864 14597298
TCONS_00045409 False 3081 mRNA 0.32 3 14595460 14601780
TCONS_00045410 False 939 mRNA 0.43 4 14595680 14600218
TCONS_00045411 False 972 mRNA 0.43 4 14595680 14600256
TCONS_00045412 True 868 mRNA 0.44 4 14595719 14600134

Neighbor

gene id symbol gene type direction distance location
XLOC_022843 ngdn coding upstream 24706 14541013 ~ 14557158 (+)
XLOC_022842 si:dkeyp-73g8.5 coding upstream 49795 14527935 ~ 14532069 (+)
XLOC_022841 prdm14 coding upstream 125761 14451404 ~ 14456103 (+)
XLOC_022839 ncoa2 coding upstream 136727 14240196 ~ 14445137 (+)
XLOC_022840 BX248495.1 coding upstream 230844 14350900 ~ 14351020 (+)
XLOC_022846 BX294113.1 coding downstream 22051 14623831 ~ 14636303 (+)
XLOC_022847 BX294113.3 coding downstream 33523 14635303 ~ 14635419 (+)
XLOC_022848 gdap1 coding downstream 111996 14713776 ~ 14725763 (+)
XLOC_022849 pi15a coding downstream 200064 14801844 ~ 14810634 (+)
XLOC_022850 crispld1a coding downstream 257458 14859238 ~ 14885354 (+)
XLOC_022837 NA non-coding upstream 503228 14055096 ~ 14078636 (+)
XLOC_022835 NA non-coding upstream 817060 13758700 ~ 13764804 (+)
XLOC_022832 NA non-coding upstream 981592 13355261 ~ 13600272 (+)
XLOC_022824 NA non-coding upstream 1727672 12853386 ~ 12854192 (+)
XLOC_022853 BX640518.1 non-coding downstream 811209 15412989 ~ 15413105 (+)
XLOC_022859 NA non-coding downstream 1564985 16166765 ~ 16194730 (+)
XLOC_022860 BX005275.2 non-coding downstream 1572419 16174199 ~ 16177300 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000018_01005482_01007949 NA coding CI01000018 null 1005043 ~ 1008155 (+)