LOC110523591 (LOC102784149)


Basic Information

Item Value
gene id LOC110523591
gene name LOC102784149
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 29821413 ~ 29831150 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110523591
TCTGACGTGAAGAATCTCACCTGTTTCAAAATGCCTGCtttctgtgttgttgtcatgtgctgAGTTGCTGATTTATTGGCAAGCaccatttgtttttttttttaaatattctaACAATATCAAAGCGTTGAACAAAGTTAAACAAGTTAACGGTGCAGAACTTATCGCAATGGCTCAAAGAAAGAAGAAGCTGATGAAGAAAAATATACACATTGGCCACCGGGAGCATGACGAGTCGGATGCCTGGAAGACAGTTACCTCGGTTCCCTGGAGCTTCATCAGAGTGTCTGTCTGATGTGGAACCTGACACCAGGGAGCTGGTCAGAGCTCAGAACAAGAAGAAAAATAAGTCTGGGAGCTTCCGGTCCATGGGTCTCAGTTACCCAGTTTTTAAAGGGGTCATGAAGAAGGGGTACAAAGTCCCTACTCCAATCCAGAGAAAGaCTAGCCCAGTGATTCTAGATGGAAAGGACATGGTTGCCATGGCAAGGACAGGCAGTGGGAAAATAGCTGCGTTCTTGGTGCCCATGTTTGAGAATGTACAAAGGCCCCCCAGGCCCAGACAGGGGCCAGGGCTCTCATTCTGACCCCCACCAGAGAGTTGGTGCTGCAAACCATGAAGTTCACCAAAGAGTTGGGGAAATTCACTGGCCTTAAGACTGCTTTGATCCTTGGTGGAGACAGAATGGATGATCAGTTTGCTGCACTTCATGAGACCCCAGACATAATTATTGGTACCCCAGGTCGTCTGATGCATGTTGTCATGGAGATGAACCTGAAGCTACAGAGCGTGGAGTACGTTGTGTTTGACGAGGCTGACAGGCTGTTTGAGATGGGCTTTGCTGACCAGCTCCAGGAGATCATCCGGAGGCTTCCAGACAACAGACAGACACTGCTGTTCTCCGCCACCCTGCCCAAACTACTGGTGGAGTTTCCCATCAATGGGTTGGCGGAGCCAGTGCTGATTCGTCTGGAAGTGGACAGCAAGCTGAGTGAGCTGCTGAAGCTGTCGTTCTTCCACCTGAGGATGGATGACAAGCCGGCTCTGCTTCTCCACCTGCTGAGGAATGTGGCGACGCCCCAGGAGCAGACAGTAGTCTTTGTTGCCACCAAACACCATGTGGAGTACCTCAGAGAGCTGCTGTCCTCTGAGGGCGTGGAGTGTGCCTACATCTACAGTGCCCTGGACCAGACTGCCAGGAAGATCAACATTGGTAAATTTTTCCCCCGCAAGGCCATGGTGCTGGTTGTTACAGACGTGGCTGCTCGTGGTATAGACATCCCCCTGCTGGACAACGTCATCAACTACAACTTCCCCTCCAAAGCCAAGCTCTTCCTGCATAGAGTTGGTCGAGTTGCACGCGCAGGAGGCCGCGGTGGCGCTGCCTACAGCCTGGTGTGTACAGATGAGATACCTTTTGTCTTTGACCTCCATCTCTTCCTAGGGAGACCCCTTCAGCTGGATACACCTGACCATCAGCAAGagTCGGACGGTGTGTTTGGTCGTGTTCCCCAGAGCATCCTGGATGATGAGGAGTCCCAGCTGATCACGGCCCATTAGAGCTCTCATGAACTGCAGAACCTGCGCCGCATAGAGGACAACGCCTACAAGCAGTAGtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcTTTCAGGGTCAGGCTTAGAGAAAATGGAACTGGAGCGCCTTCAAATAGTGGACTGCATTAAGGACTACAAGGCTAAAGCTACAATCTTTGAGATCATCTCGAACAGCAAGACCAACGCCAGCGTGGGGATGCGAGCCAAGCGTTCTAGGGACACGGCTGGTGGATAATTTCACCCAGAAGGTGGTGGTTCTGGCTGCAGAGGGCAGGTATCATGTTCCTGTCACTGCTCTGCCCTCCACACACCACACGACAGACCAGGAGGACAGTGAAGAGGAGGACCTTCAGGGGGTGTTCTCTgaggtagtgggggggggggggggggggggaagcccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGTAGGAGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGAAACTCGTGACACGAGGTTGTACAAAGCTGCCCATTGTGCAGTGTGAAATTAATTTCTGTTTTTTCTGGGCAGTCGAACAGTTCGATGAGGTCAACCACATTTGTGCAAAGAATAACCTGCCAGTCTACCAGAAGGTGTCAGTAAAGCCTAGAGAGAGGTCTGCCAGAGGAACTTGGGTCACTACCaacatgttttcatttcagaCATCTGTATTCATTTGACCCAGCTGACAGCGGAGCAACCAGAGGGGTGTTGAGAGATTGACTCCGGGACAAGagtggggtggagatggaggTTCACTAGAATAAGGAGAATTGGGGAACGTTTCTGTCAGCAAAGAGCCACAAAGCCAACGTCCCGCCTCCCATCGCTCGGCTATAAGATAGCTGTGTTCTAAATACTTAACAGGACATGTTTGGGAAAGGGCTTTATAGTCGAGGGAGAAGTAATCTACACGATCAAAACTCTTTcttcaaaacatgttttttttttcttctttttgttaCATTTTAATATACTACAAAAGTATTCATTTCATAAATGAATACACTAAAACATACATTAGATAAATACAGTCAGAATGTTTTTTGCAGATCATCCATATCCAATTGTTTTTGTTGACTGTAGCCAACACTGAACTTTACATACAGCATAGTTTATGTACAGAATATGTGAAGTTGAACAAACTAACCAAACCTATTTGCTGTGGTCCCTTTTTCAACTTTACaggaaaaatatatatgtaacttaccctaaacctaacaacAGGGTCAGAGATGCAGTGTGTTTTGAAGTCCTGCCATTGTACTACAGAGCAAGGGAGCTGACGTGACTGGAGAAACCCACTCCATCTGGATGTGGTTAGATGCAAGTTGTTTGATGATATGTGTA
>TU440431
ccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGAAACTCGTGACACGAGGTTGTACAAAGCTGCCCATTGTGCAGTGTGAAATTAATTTCTGTTTTTTCTGGGCAGTCGAACAGTTCGATGAGGTCAACCACATTTGTGCAAAGAATAACCTGCCAGTCTACCAGAAGGTGTCAGTAAAGCCTAGAGAGAGGTCTGCCAGAGGAACTTGGGTCACTACCaacatgttttcatttcagaCATCTGTATTCATTTGACCCAGCTGACAGCGGAGCAACCAGAGGGGTGTTGAGAGATTGACTCCGGGACAAGagtggggtggagatggaggTTCACTAGAATAAGGAGAATTGGGGAACGTTTCTGTCAGCAAAGAGCCACAAAGCCAACGTCCCGCCTCCCATCGCTCGGCTATAAGATAGCTGTGTTCTAAATACTTAACAGGACATGTTTGGGAAAGGGCTTTATAGTCGAGGGAGAAGTAATCTACACGATCAAAACTCTTTcttcaaaacatgttttttttttcttctttttgttaCATTTTAATATACTACAAAAGTATTCATTTCATAAATGAATACACTAAAACATACATTAGATAAATACAGTCAGAATGTTTTTTGCAGATCATCCATATCCAATTGTTTTTGTTGACTGTAGCCAACACTGAACTTTACATACAGCATAGTTTATGTACAGAATATGTGAAGTTGAACAAACTAACCAAACCTATTTGCTGTGGTCCCTTTTTCAACTTTACaggaaaaatatatatgtaacttaccctaaacctaacaacAGGGTCAGAGATGCAGTGTGTTTTGAAGTCCTGCCATTGTACTACAGAGCAAGGGAGCTGACGTGACTGGAGAAACCCACTCCATCTGGATGTGGTTAGATGCAAGTTGTTTGATGATATGTGTACATGCTATCACACGTTATCTATGGTCAAAGTTATCTGTAGGCCAGCTCTGCCCGAATGAAGATTTGTGGCTTCCATTTCTGTTTGTGAATTTTCTCCAAGGAAAATGAAGACGGCTGctaggtacagtgcctttggaaaatgTTCTCGCCCCGTGACTTTATCCacctttttgttgtgttacagcctgaatttaaaatgtattcaattaccAAAAAAgtcactagcctacacacaataccccataatgtcaaagtggaataatgttttttttttttttacatttgtacaaatgaattacaaatgaaaagctgaaatgtattgggtcagtaagtattcaacccctttgttaggacaagcctaaatacattcaggagtaaaattgtgcttaataagttgcatggactaactcggtgtgcaataatggtgtttaacgtgattt
>TU440412
ccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGAAACTCGTGACACGAGGTTGTACAAAGCTGCCCATTGTGCAGTGTGAAATTAATTTCTGTTTTTTCTGGGCAGTCGAACAGTTCGATGAGGTCAACCACATTTGTGCAAAGAATAACCTGCCAGTCTACCAGAAGGTGTCAGTAAAGCCTAGAGAGAGGTCTGCCAGAGGAACTTGGGTCACTACCaacatgttttcatttcagaCATCTGTATTCATTTGACCCAGCTGACAGCGGAGCAACCAGAGGGGTGTTGAGAGATTGACTCCGGGACAAGagtggggtggagatggaggTTCACTAGAATAAGGAGAATTGGGGAACGTTTCTGTCAGCAAAGAGCCACAAAGCCAACGTCCCGCCTCCCATCGCTCGGCTATAAGATAGCTGTGTTCTAAATACTTAACAGGACATGTTTGGGAAAGGGCTTTATAGTCGAGGGAGAAGTAATCTACACGATCAAAACTCTTTcttcaaaacatgttttttttttcttctttttgttaCATTTTAATATACTACAAAAGTATTCATTTCATAAATGAATACACTAAAACATACATTAGATAAATACAGTCAGAATGTTTTTTGCAGATCATCCATATCCAATTGTTTTTGTTGACTGTAGCCAACACTGAACTTTACATACAGCATAGTTTATGTACAGAATATGTGAAGTTGAACAAACTAACCAAACCTATTTGCTGTGGTCCCTTTTTCAACTTTACaggaaaaatatatatgtaacttaccctaaacctaacaacAGGGTCAGAGATGCAGTGTGTTTTGAAGTCCTGCCATTGTACTACAGAGCAAGGGAGCTGACGTGACTGGAGAAACCCACTCCATCTGGATGTGGTTAGATGCAAGTTGTTTGATGATATGTGTACATGCTATCACACGTTATCTATGGTCAAAGTTATCTGTAGGCCAGCTCTGCCCGAATGAAGATTTGTGGCTTCCATTTCTGTTTGTGAATTTTCTCCAAGGAAAATGAAGACGGCTGctaggtacagtgcctttggaaaatgTTCTCGCCCCGTGACTTTATCCacctttttgttgtgttacagcctgaatttaaaatgtattcaattaccAAAAAAgtcactagcctacacacaataccccataatgtcaaagtggaataatgttttttttttttttacatttgtacaaatgaattacaaatgaaaagctgaaatgtattgggtcagtaagtattcaacccctttgttaggacaagcctaaatacattcaggagtaaaattgtgc
>TU440403
ccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGAAACTCGTGACACGAGGTTGTACAAAGCTGCCCATTGTGCAGTGTGAAATTAATTTCTGTTTTTTCTGGGCAGTCGAACAGTTCGATGAGGTCAACCACATTTGTGCAAAGAATAACCTGCCAGTCTACCAGAAGGTGTCAGTAAAGCCTAGAGAGAGGTCTGCCAGAGGAACTTGGGTCACTACCaacatgttttcatttcagaCATCTGTATTCATTTGACCCAGCTGACAGCGGAGCAACCAGAGGGGTGTTGAGAGATTGACTCCGGGACAAGagtggggtggagatggaggTTCACTAGAATAAGGAGAATTGGGGAACGTTTCTGTCAGCAAAGAGCCACAAAGCCAACGTCCCGCCTCCCATCGCTCGGCTATAAGATAGCTGTGTTCTAAATACTTAACAGGACATGTTTGGGAAAGGGCTTTATAGTCGAGGGAGAAGTAATCTACACGATCAAAACTCTTTcttcaaaacatgttttttttttcttctttttgttaCATTTTAATATACTACAAAAGTATTCATTTCATAAATGAATACACTAAAACATACATTAGATAAATACAGTCAGAATGTTTTTTGCAGATCATCCATATCCAATTGTTTTTGTTGACTGTAGCCAACACTGAACTTTACATACAGCATAGTTTATGTACAGAATATGTGAAGTTGAACAAACTAACCAAACCTATTTGCTGTGGTCCCTTTTTCAACTTTACaggaaaaatatatatgtaacttaccctaaacctaacaacAGGGTCAGAGATGCAGTGTGTTTTGAAGTCCTGCCATTGTACTACAGAGCAAGGGAGCTGACGTGACTGGAGAAACCCACTCCATCTGGATGTGGTTAGATGCAAGTTGTTTGATGATATGTGTACATGCTATCACACGTTATCTATGGTCAAAGTTATCTGTAGGCCAGCTCTGCCCGAATGAAGATTTGTGGCTTCCATTTCTGTTTGTGAATTTTCTCCAAGGAAAATGAAGACGGCTGctaggtacagtgcctttggaaaatgTTCTCGCCCCGTGACTTTATCCacctttttgttgtgttacagcctgaatttaaaatgtattcaattaccAAAAAAgtcactagcctacacacaataccccataatgtcaaagtggaataatgttttttttttttttacatttgtacaaatgaattacaaatgaaaagctgaaatgtattgg
>TU440404
ccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGA
>TU440406
ATGGTTAGCTGCTGTCCTCTGAGGGCGTGGAGTGTGCCTACATCTACAGTGCCCTGGACCAGACTGCCAGGAAGATCAACATTGGTAAATTTTTCCCCCGCAAGGCCATGGTGCTGGTTGTTACAGACGTGGCTGCTCGTGGTATAGACATCCCCCTGCTGGACAACGTCATCAACTACAACTTCCCCTCCAAAGCCAAGCTCTTCCTGCATAGAGTTGGTGGGTAACACCAACAACAGGGGGAGCATTAGAACTATAATATGGCCAACATACTGTTTTAGGTTATCTTGAATTGTAACTTATGTACGTTGGAAAGAAAGGCCAATGACAACCATCTGAGTCAATGATATATAGTGTAATGAAATTAAATGAAATTCACCTTCCTCACCATTGTCTCATCTGTGGTTTTTCAACCCCATGTCGAGTTGCACGCGCAGGAGGCCGCGGTGGCGCTGCCTACAGCCTGGTGTGTACAGATGAGATACCTTTTGTCTTTGACCTCCATCTCTTCCTAGGGAGACCCCTTCAGCTGGATACACCTGACCATCAGCAAGagTCGGACGGTGTGTTTGGTCGTGTTCCCCAGAGCATCCTGGATGATGAGGAGTCCCAGCTGATCACGGCCCATTAGAGCTCTCATGAACTGCAGAACCTGCGCCGCATAGAGGACAACGCCTACAAGCAGTAGGCATCAGAAACACAAAGGTCAGGCTTAGAGAAAATGGAACTGGAGCGCCTTCAAATAGTGGACTGCATTAAGGACTACAAGGCTAAAGCTCACCTTTTCTCCAGACAATCTTTGAGATCATCTCGAACAGCAAGACCAACGCCAGCGTGGGGATGCGAGCCAAGCGTTCTAGGGACACGGCTGGTGGATAATTTCACCCAGAAGGTGGTGGTTCTGGCTGCAGAGGGCAGGTATCATGTTCCTGTCACTGCTCTGCCCTCCACACACCACACGACAGACCAGGAGGACAGTGAAGAGGAGGACCTTCAGGGGGTGTTCTCTgaggtagtgggggggggggggggggggggaagcccCAGGGCGAGGTGGAGAGGCCAGACAGTAAGAAGGCCAAACAGACTGGCCACGGTGAGAACTACATCCCCTACAGACCCAAAGACTTCAACTCTGAGAGAGGacTGAGCCTGGGAACCGAAGGCATAACGTTTGAGCAGCAGGCTTCTACTGCTGTACTGGACCTGATAGGAGACAGACTCAACCAGCACAAACACACGATGAAGTGAGATCGCTAGAGAAAGCGCTTTGTCAAAGAAACAGGAAAGGAGGCAGACCAGAAGAAGATGAGAACAGAGACGGGACAGATGATCAAGAAGAACTTCTATGAAGAGTGGAAGAAGAAGTACAAGGTGGATGACTGAGGGGGTGGAGATTCAGATGGAGAGGCTGGAGGCAGAGGAAGGAGGTGTGGAGGCCGAGGCAGGCCAGACCAGGGCCGAGGTTGCCCATCCCGGGGGCCCAACTCCCAGCCCCTGGGTCCCCCAGGCCAGCTGGGGTGGAGGCTTCCGGGGCCCGCGCTCAGAGCTGAAGAGCTGTGACCAGATCCTAAAGCAGCGCTggaagacagagaaacagaggttcCTGCAGAGTGGCGGCTTGAAGAAGCTCCGGGGCATGGGCAAGCAGCGCCTCAATGACCAGAAGAAGTTTGGCTTCAGCCCTGATGTCCACAAGAAGGGCCAGATGAAGAGACTCTGAGGGAGGGGGTGATGAATAGATGATTGATGTGGAAAAAGAGGTAGTGAGAGTTGGAAGAATTGACGAGAAGATGAGGCAATGGATGGAGAAGCTTTGGATCCCAAGTTGGAGGGATATGGAAGGTGGATGTCAATAGTTTAAAGTTGCCTTTCTCTCCATGACCCCCCTACATCTGGACTGGTCGGTCAGTGCATATGTAGGAAGAGAAACACGCCGAGAAAGCCATttgagactattgagatgcagcccaagGGGTGCTTGCAGAGCTTTGTGTATGGCACTGCAGTGTGGTGTCATGGGAAGATCCGTGTCCACATTTTGTGTGCCCCTAGCCTGGGTGTGGACTGCATGACGGGGCTAGAGCGATTTGAAACTTGTATTTTGCAGATCTATTTGCATCAACCTATCCAGATGGATTGCCATGTCAATATATTTGTTTGTGTATATTATTAATTCAAAGCTAAAGTGTGATTGTGTTATCTGTGACTGTCATTCTTTATTATAAAGTCCTAGGAGGAGCAGAGA

Function

NR:

description
PREDICTED: ATP-dependent RNA helicase DDX54

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110523591 False 4133 mRNA 0.51 20 29821853 29831150
TU440431 False 2537 TUCP 0.45 5 29821413 29824570
TU440412 False 2483 TUCP 0.45 5 29821467 29824570
TU440403 False 2420 TUCP 0.45 5 29821530 29824570
TU440404 False 1206 TUCP 0.51 5 29822744 29824570
TU440406 True 2248 TUCP 0.51 9 29822744 29828308

Neighbor

gene id symbol gene type direction distance location
LOC110523579 NA coding downstream 549338 29263213 ~ 29272515 (-)
LOC110523577 LOC106566842 coding downstream 606869 29201750 ~ 29214984 (-)
LOC110523575 LOC106566797 coding downstream 647598 29171419 ~ 29174255 (-)
bspry LOC106566771 coding downstream 705488 29103563 ~ 29116365 (-)
traf2b traf2 coding downstream 729006 29070573 ~ 29149445 (-)
LOC110523582 LOC106566947 coding upstream 71837 29902987 ~ 29976678 (-)
LOC110523588 exos2 coding upstream 146108 29977258 ~ 29981191 (-)
LOC110523587 LOC106566964 coding upstream 155068 29986218 ~ 29991066 (-)
LOC110523584 LOC106566971 coding upstream 165321 29996471 ~ 30022396 (-)
LOC110522908 NA coding upstream 204567 30035717 ~ 30078766 (-)
G387728 NA non-coding downstream 112840 29708790 ~ 29709013 (-)
G387724 NA non-coding downstream 120548 29701076 ~ 29701305 (-)
G387723 NA non-coding downstream 121376 29700166 ~ 29700477 (-)
G387373 NA non-coding downstream 147003 29674618 ~ 29674850 (-)
G387372 NA non-coding downstream 147328 29674309 ~ 29674525 (-)
G387816 NA non-coding upstream 13293 29844443 ~ 29859826 (-)
G387939 LOC106567059 non-coding upstream 336969 30168119 ~ 30211886 (-)
G387938 NA non-coding upstream 381542 30212692 ~ 30217966 (-)
G388003 NA non-coding upstream 445942 30277092 ~ 30277316 (-)
G388006 NA non-coding upstream 448655 30279805 ~ 30280114 (-)
G387321 LOC100136012 other downstream 177105 29603183 ~ 29644748 (-)
G387052 LOC106566935 other downstream 386542 29434605 ~ 29435311 (-)
G387064 NA other downstream 427037 29393095 ~ 29394816 (-)
G386725 NA other downstream 776695 29009238 ~ 29045158 (-)
anapc2 LOC106566731 other downstream 817098 28994099 ~ 29004755 (-)
G392227 NA other upstream 3520267 33351417 ~ 33352338 (-)
G392245 NA other upstream 3549642 33380792 ~ 33381565 (-)
G392503 LOC106565394 other upstream 3903012 33734162 ~ 33762381 (-)
G392858 NA other upstream 4316313 34147463 ~ 34148628 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G176217 ddx54 non-coding NC_053128.1 CM020925.1 19522497 ~ 19523358 (-)