Gene
RNA
| Item | Value |
|---|---|
| gene id | G387321 |
| gene name | LOC100136012 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 29603183 ~ 29644748 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU439860 | True | 408 | TUCP | 0.50 | 2 | 29603183 | 29644748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523579 | NA | coding | downstream | 330668 | 29263213 ~ 29272515 (-) |
| LOC110523577 | LOC106566842 | coding | downstream | 388199 | 29201750 ~ 29214984 (-) |
| LOC110523575 | LOC106566797 | coding | downstream | 428928 | 29171419 ~ 29174255 (-) |
| bspry | LOC106566771 | coding | downstream | 486818 | 29103563 ~ 29116365 (-) |
| traf2b | traf2 | coding | downstream | 510336 | 29070573 ~ 29149445 (-) |
| LOC110523591 | LOC102784149 | coding | upstream | 177105 | 29821413 ~ 29831150 (-) |
| LOC110523582 | LOC106566947 | coding | upstream | 258239 | 29902987 ~ 29976678 (-) |
| LOC110523588 | exos2 | coding | upstream | 332510 | 29977258 ~ 29981191 (-) |
| LOC110523587 | LOC106566964 | coding | upstream | 341470 | 29986218 ~ 29991066 (-) |
| LOC110523584 | LOC106566971 | coding | upstream | 351723 | 29996471 ~ 30022396 (-) |
| G387242 | NA | non-coding | downstream | 36473 | 29566509 ~ 29566710 (-) |
| G387223 | NA | non-coding | downstream | 60497 | 29542477 ~ 29542686 (-) |
| G387211 | NA | non-coding | downstream | 69203 | 29533773 ~ 29533980 (-) |
| G387202 | NA | non-coding | downstream | 75141 | 29527801 ~ 29528042 (-) |
| G387201 | NA | non-coding | downstream | 76239 | 29526714 ~ 29526944 (-) |
| G387353 | NA | non-coding | upstream | 6636 | 29651384 ~ 29652168 (-) |
| G387366 | NA | non-coding | upstream | 23898 | 29668646 ~ 29668869 (-) |
| G387371 | NA | non-coding | upstream | 28488 | 29673236 ~ 29673455 (-) |
| G387372 | NA | non-coding | upstream | 29561 | 29674309 ~ 29674525 (-) |
| G387373 | NA | non-coding | upstream | 29870 | 29674618 ~ 29674850 (-) |
| G387052 | LOC106566935 | other | downstream | 167872 | 29434605 ~ 29435311 (-) |
| G387064 | NA | other | downstream | 208367 | 29393095 ~ 29394816 (-) |
| G386725 | NA | other | downstream | 558025 | 29009238 ~ 29045158 (-) |
| anapc2 | LOC106566731 | other | downstream | 598428 | 28994099 ~ 29004755 (-) |
| G386222 | NA | other | downstream | 1111811 | 28490966 ~ 28491372 (-) |
| G387939 | LOC106567059 | other | upstream | 566015 | 30168119 ~ 30211886 (-) |
| G392227 | NA | other | upstream | 3706669 | 33351417 ~ 33352338 (-) |
| G392245 | NA | other | upstream | 3736044 | 33380792 ~ 33381565 (-) |
| G392503 | LOC106565394 | other | upstream | 4089414 | 33734162 ~ 33762381 (-) |
