Gene
RNA
| Item | Value |
|---|---|
| gene id | G379828 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22766610 ~ 22766875 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU431779 | True | 266 | lncRNA | 0.38 | 1 | 22766610 | 22766875 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch1073-398f15.1 | LOC106568085 | coding | downstream | 5113 | 22757104 ~ 22761497 (-) |
| dtwd2 | dtwd2 | coding | downstream | 24011 | 22731063 ~ 22742599 (-) |
| trnag-ccc | NA | coding | downstream | 36312 | 22730228 ~ 22730298 (-) |
| LOC110523441 | LOC106568058 | coding | downstream | 36567 | 22721826 ~ 22730043 (-) |
| c5h2orf42 | cssa01h2orf42 | coding | downstream | 49455 | 22711733 ~ 22717155 (-) |
| jmy | LOC106568093 | coding | upstream | 32821 | 22799696 ~ 22859199 (-) |
| bhmt | LOC106568115 | coding | upstream | 95406 | 22862281 ~ 22867111 (-) |
| scamp1 | scamp1 | coding | upstream | 259408 | 23026283 ~ 23045373 (-) |
| pde8b | LOC106568179 | coding | upstream | 488349 | 23255224 ~ 23351406 (-) |
| aggf1 | aggf1 | coding | upstream | 585153 | 23352028 ~ 23360493 (-) |
| G379824 | NA | non-coding | downstream | 2692 | 22763666 ~ 22763918 (-) |
| G379822 | NA | non-coding | downstream | 10960 | 22754269 ~ 22755650 (-) |
| G379745 | NA | non-coding | downstream | 104362 | 22617412 ~ 22662248 (-) |
| G379698 | NA | non-coding | downstream | 260474 | 22503862 ~ 22506136 (-) |
| G379556 | NA | non-coding | downstream | 408524 | 22357064 ~ 22358086 (-) |
| G379863 | NA | non-coding | upstream | 133593 | 22900468 ~ 22901152 (-) |
| G379972 | NA | non-coding | upstream | 244502 | 23011377 ~ 23012005 (-) |
| G379973 | NA | non-coding | upstream | 246202 | 23013077 ~ 23013439 (-) |
| G379975 | NA | non-coding | upstream | 252365 | 23019240 ~ 23019454 (-) |
| G380002 | ap3b1 | non-coding | upstream | 347672 | 23114547 ~ 23117035 (-) |
| LOC110523434 | LOC106567989 | other | downstream | 587297 | 22177265 ~ 22179322 (-) |
| G378359 | NA | other | downstream | 974617 | 21791662 ~ 21791993 (-) |
| G377991 | NA | other | downstream | 1736827 | 21029458 ~ 21029783 (-) |
| G377809 | LOC106568602 | other | downstream | 2061470 | 20704613 ~ 20705140 (-) |
| G377800 | NA | other | downstream | 2071902 | 20694096 ~ 20694708 (-) |
| LOC110522831 | LOC106563032 | other | upstream | 780325 | 23488916 ~ 23556681 (-) |
| G380610 | LOC106567829 | other | upstream | 942923 | 23709798 ~ 23711891 (-) |
| G380648 | NA | other | upstream | 992164 | 23759039 ~ 23761807 (-) |
| LOC110523492 | LOC106567536 | other | upstream | 2672146 | 25437411 ~ 25441794 (-) |
