Gene
RNA
| Item | Value |
|---|---|
| gene id | G379863 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 22900468 ~ 22901152 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: dimethylglycine dehydrogenase, mitochondrial isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU431819 | True | 600 | lncRNA | 0.48 | 2 | 22900468 | 22901152 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bhmt | LOC106568115 | coding | downstream | 33357 | 22862281 ~ 22867111 (-) |
| jmy | LOC106568093 | coding | downstream | 41269 | 22799696 ~ 22859199 (-) |
| si:ch1073-398f15.1 | LOC106568085 | coding | downstream | 138971 | 22757104 ~ 22761497 (-) |
| dtwd2 | dtwd2 | coding | downstream | 157869 | 22731063 ~ 22742599 (-) |
| trnag-ccc | NA | coding | downstream | 170170 | 22730228 ~ 22730298 (-) |
| scamp1 | scamp1 | coding | upstream | 125131 | 23026283 ~ 23045373 (-) |
| pde8b | LOC106568179 | coding | upstream | 354072 | 23255224 ~ 23351406 (-) |
| aggf1 | aggf1 | coding | upstream | 450876 | 23352028 ~ 23360493 (-) |
| s100z | s100z | coding | upstream | 508245 | 23409397 ~ 23414490 (-) |
| LOC110523457 | LOC106568234 | coding | upstream | 525439 | 23426591 ~ 23436059 (-) |
| G379828 | NA | non-coding | downstream | 133593 | 22766610 ~ 22766875 (-) |
| G379824 | NA | non-coding | downstream | 136550 | 22763666 ~ 22763918 (-) |
| G379822 | NA | non-coding | downstream | 144818 | 22754269 ~ 22755650 (-) |
| G379745 | NA | non-coding | downstream | 238220 | 22617412 ~ 22662248 (-) |
| G379698 | NA | non-coding | downstream | 394332 | 22503862 ~ 22506136 (-) |
| G379972 | NA | non-coding | upstream | 110225 | 23011377 ~ 23012005 (-) |
| G379973 | NA | non-coding | upstream | 111925 | 23013077 ~ 23013439 (-) |
| G379975 | NA | non-coding | upstream | 118088 | 23019240 ~ 23019454 (-) |
| G380002 | ap3b1 | non-coding | upstream | 213395 | 23114547 ~ 23117035 (-) |
| G380000 | NA | non-coding | upstream | 253154 | 23154306 ~ 23157815 (-) |
| LOC110523434 | LOC106567989 | other | downstream | 721155 | 22177265 ~ 22179322 (-) |
| G378359 | NA | other | downstream | 1108475 | 21791662 ~ 21791993 (-) |
| G377991 | NA | other | downstream | 1870685 | 21029458 ~ 21029783 (-) |
| G377809 | LOC106568602 | other | downstream | 2195328 | 20704613 ~ 20705140 (-) |
| LOC110522831 | LOC106563032 | other | upstream | 646048 | 23488916 ~ 23556681 (-) |
| G380610 | LOC106567829 | other | upstream | 808646 | 23709798 ~ 23711891 (-) |
| G380648 | NA | other | upstream | 857887 | 23759039 ~ 23761807 (-) |
| LOC110523492 | LOC106567536 | other | upstream | 2537869 | 25437411 ~ 25441794 (-) |
| G383422 | NA | other | upstream | 3095654 | 25996806 ~ 25998780 (-) |
