Gene
RNA
| Item | Value |
|---|---|
| gene id | G385335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 27705954 ~ 27706422 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU437695 | True | 469 | lncRNA | 0.42 | 1 | 27705954 | 27706422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110522882 | sfswap | coding | downstream | 424447 | 27140510 ~ 27281507 (-) |
| mmp17a | mmp17 | coding | downstream | 641574 | 26963001 ~ 27064380 (-) |
| ulk1b | NA | coding | downstream | 768894 | 26901777 ~ 26937060 (-) |
| LOC110523523 | ub2g1 | coding | downstream | 807081 | 26895242 ~ 26898873 (-) |
| LOC110523517 | LOC106566303 | coding | downstream | 850775 | 26810766 ~ 26855179 (-) |
| LOC110522892 | LOC106563163 | coding | upstream | 58433 | 27764855 ~ 27944738 (-) |
| LOC110523530 | LOC100195848 | coding | upstream | 311324 | 28017746 ~ 28041548 (-) |
| LOC118964545 | NA | coding | upstream | 337544 | 28043966 ~ 28045743 (-) |
| LOC110523532 | LOC106566453 | coding | upstream | 369358 | 28075780 ~ 28080536 (-) |
| LOC110523533 | LOC100194645 | coding | upstream | 383249 | 28089671 ~ 28093393 (-) |
| G384904 | NA | non-coding | downstream | 231553 | 27474138 ~ 27474401 (-) |
| G384888 | NA | non-coding | downstream | 247358 | 27458332 ~ 27458596 (-) |
| G384854 | NA | non-coding | downstream | 298900 | 27406591 ~ 27407054 (-) |
| G384783 | NA | non-coding | downstream | 327810 | 27377886 ~ 27378144 (-) |
| G384780 | NA | non-coding | downstream | 329577 | 27375732 ~ 27376377 (-) |
| G385338 | NA | non-coding | upstream | 3490 | 27709912 ~ 27710116 (-) |
| G385400 | NA | non-coding | upstream | 100755 | 27807177 ~ 27807505 (-) |
| G385401 | NA | non-coding | upstream | 101190 | 27807612 ~ 27807830 (-) |
| G385402 | NA | non-coding | upstream | 101693 | 27808115 ~ 27808382 (-) |
| G385425 | NA | non-coding | upstream | 141780 | 27848202 ~ 27848401 (-) |
| G383422 | NA | other | downstream | 1707174 | 25996806 ~ 25998780 (-) |
| LOC110523492 | LOC106567536 | other | downstream | 2264160 | 25437411 ~ 25441794 (-) |
| G380648 | NA | other | downstream | 3944147 | 23759039 ~ 23761807 (-) |
| G380610 | LOC106567829 | other | downstream | 3994063 | 23709798 ~ 23711891 (-) |
| LOC110522831 | LOC106563032 | other | downstream | 4149411 | 23488916 ~ 23556681 (-) |
| G385617 | NA | other | upstream | 302845 | 28009267 ~ 28010077 (-) |
| G385769 | NA | other | upstream | 508121 | 28214543 ~ 28214819 (-) |
| G386126 | NA | other | upstream | 645353 | 28351775 ~ 28354745 (-) |
| G386222 | NA | other | upstream | 784544 | 28490966 ~ 28491372 (-) |
| anapc2 | LOC106566731 | other | upstream | 1297261 | 28994099 ~ 29004755 (-) |
