Gene
RNA
| Item | Value |
|---|---|
| gene id | G385654 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 28099324 ~ 28099558 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU438039 | True | 235 | lncRNA | 0.44 | 1 | 28099324 | 28099558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523533 | LOC100194645 | coding | downstream | 5931 | 28089671 ~ 28093393 (-) |
| LOC110523532 | LOC106566453 | coding | downstream | 18788 | 28075780 ~ 28080536 (-) |
| LOC118964545 | NA | coding | downstream | 53581 | 28043966 ~ 28045743 (-) |
| LOC110523530 | LOC100195848 | coding | downstream | 57776 | 28017746 ~ 28041548 (-) |
| LOC110522892 | LOC106563163 | coding | downstream | 154586 | 27764855 ~ 27944738 (-) |
| LOC110522901 | LOC106566140 | coding | upstream | 26295 | 28125853 ~ 28131303 (-) |
| LOC110523536 | LOC106566140 | coding | upstream | 41951 | 28141409 ~ 28197809 (-) |
| ndr1 | ndr1 | coding | upstream | 260921 | 28360479 ~ 28362903 (-) |
| LOC110523544 | LOC106567207 | coding | upstream | 304947 | 28404505 ~ 28406150 (-) |
| c7b | c7-1 | coding | upstream | 331488 | 28431046 ~ 28435357 (-) |
| G385493 | NA | non-coding | downstream | 142878 | 27956235 ~ 27956446 (-) |
| G385486 | NA | non-coding | downstream | 146578 | 27952521 ~ 27952746 (-) |
| G385477 | NA | non-coding | downstream | 157070 | 27942027 ~ 27942254 (-) |
| G385425 | NA | non-coding | downstream | 250923 | 27848202 ~ 27848401 (-) |
| G385402 | NA | non-coding | downstream | 290942 | 27808115 ~ 27808382 (-) |
| G385657 | NA | non-coding | upstream | 3682 | 28103240 ~ 28103603 (-) |
| G385600 | LOC106566461 | non-coding | upstream | 12050 | 28111608 ~ 28112752 (-) |
| G385743 | NA | non-coding | upstream | 36526 | 28136084 ~ 28136313 (-) |
| G385617 | NA | other | downstream | 89247 | 28009267 ~ 28010077 (-) |
| G383422 | NA | other | downstream | 2100544 | 25996806 ~ 25998780 (-) |
| LOC110523492 | LOC106567536 | other | downstream | 2657530 | 25437411 ~ 25441794 (-) |
| G380648 | NA | other | downstream | 4337517 | 23759039 ~ 23761807 (-) |
| G380610 | LOC106567829 | other | downstream | 4387433 | 23709798 ~ 23711891 (-) |
| G385769 | NA | other | upstream | 114985 | 28214543 ~ 28214819 (-) |
| G386126 | NA | other | upstream | 252217 | 28351775 ~ 28354745 (-) |
| G386222 | NA | other | upstream | 391408 | 28490966 ~ 28491372 (-) |
| anapc2 | LOC106566731 | other | upstream | 904125 | 28994099 ~ 29004755 (-) |
| G386725 | NA | other | upstream | 909680 | 29009238 ~ 29045158 (-) |
