G391513 (LOC100136561)


Basic Information

Item Value
gene id G391513
gene name LOC100136561
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 33158826 ~ 33162980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU444420
GTAGACTTCTTAATTGCATTCATTTACTTTTGAAGAAAAAATGGTTACAATCAGAAATCCATCTGGTGGTACTAGTAGCCTTGCATTTATTTGTGACATAACAAGACCAATCTGTAGAGCTGTGAATGTAGCATGATGTCAATTATGCATCAGGGAGCCTGTGCTCAGTGAGAACTACCTCAGATGGAGGGAAGGGTGTTAGACCACCAGTTCACAAAGCGCACCCTCATCTTCTCATGGACGGAGTTCCTGTTCATTTTGGCGTTGATCTCCAGGTACTTTTGCCCAGAGGTGGTGTATGCAGGCCAGGTCACAGGCACATTGGACTCCCCCTTGTTGGGGTCTCCGGTCCTGGCGAAGTTGGTCCAGTAGGCGATAAAGTATTTGGAGACATCGCGGTACTTGGGCCAGTATGCCAGGGGTGTGGAGAAGGGCTTGCCAAACACAAACTGCAGGTCCTCAGCGTGATCAGCCTCCATCCAGCTGGGGAAAGGTAGAACTATCCCGGACATGCGGCTGGGCTCTGAGAACAGGTAGGAGTAGGTGCGTGCAGATGGGCATTGGAGGCGTGCAGATAGAGAGCAGCCTGGGTAGGAACCAGGAAGACGTAGTCAGTCTCGATCATAACAACAGTCTTCTTGATGGTCTCCTGACTGGGCTTATCGCCCCAGTCTGCCGTGTACTCTGCGAAAGCGCTATTGATAGAGGCCTCTCCCTTCTTAGTCAAAGAACCCAGGAGCAGTTTCACATCTGACCTTCAGTGAGGAAGCGAGAGATTAGTCTCAAGAGATCTAACAACCCCTTCTTAAGCCAACTGTGTTAGGTACCTGCCCAAACTGATAACCCTACTCTTTTTAATACATGTTTTATTCTACTCCTACTTGTTAGTTAGACTTGGTTGCTTCTATAAAATGCTTTGTGGGTACATCTGCTGTCCCATTTAAGCTACATAATGCACATGGCCAACACTGAACAGACTACACTCCTCCTCCCAGGTAACCAATCAGCCCAAAGTCACTCACAGAGGGAGGTTAGCGAGTGGCTTGTTGACGGCGGGTAAATCTAATCCAGTGAATAGGTGGGCATCCATGCTGTTGACCCCTGCAAGGTAGTCAATGTCAGCAGCGTTGTGGAACAGTTTCCCTGGGTGATCAGGCAGGAAGTCCCCATCGATCACTGGGGAGAGGGCCAGGTTGCCCACTATGGGCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444420 True 1210 TUCP 0.50 3 33158826 33162980

Neighbor

gene id symbol gene type direction distance location
LOC110523632 LOC106565566 coding upstream 194857 32909966 ~ 32963969 (+)
LOC110523631 LOC106565876 coding upstream 255063 32900863 ~ 32903763 (+)
LOC110522915 NA coding upstream 262016 32885656 ~ 32896810 (+)
LOC110523629 LOC107720969 coding upstream 274727 32762181 ~ 32884099 (+)
LOC110523627 LOC106565641 coding upstream 422273 32734905 ~ 32736553 (+)
tsc1b LOC106565454 coding downstream 63390 33226370 ~ 33259075 (+)
LOC110523644 LOC106565434 coding downstream 254438 33417418 ~ 33446506 (+)
LOC110523645 LOC106565424 coding downstream 327143 33490123 ~ 33492398 (+)
LOC100136128 LOC106565394 coding downstream 477508 33640488 ~ 33799714 (+)
LOC110523646 LOC106565369 coding downstream 667726 33830706 ~ 33844121 (+)
G391497 NA non-coding upstream 23219 33135243 ~ 33135607 (+)
G391416 NA non-coding upstream 58000 33003985 ~ 33100826 (+)
G391450 NA non-coding upstream 94653 33063079 ~ 33064173 (+)
G391436 NA non-coding upstream 112401 33040578 ~ 33046425 (+)
G391435 LOC106565542 non-coding upstream 132488 33024322 ~ 33026338 (+)
G391525 NA non-coding downstream 30290 33193270 ~ 33199567 (+)
G391569 NA non-coding downstream 130712 33293692 ~ 33294263 (+)
G391772 NA non-coding downstream 174774 33337754 ~ 33338043 (+)
G391801 NA non-coding downstream 193863 33356843 ~ 33357184 (+)
G391818 NA non-coding downstream 222643 33385623 ~ 33385836 (+)
G390393 NA other upstream 938293 32220181 ~ 32220533 (+)
G390184 NA other upstream 1198081 31960355 ~ 31960745 (+)
G388019 NA other upstream 2871002 30286951 ~ 30287824 (+)
G387516 NA other upstream 3260692 29896986 ~ 29898134 (+)
tbx5a LOC106566939 other upstream 3412632 29741800 ~ 29763439 (+)
G391805 NA other downstream 197977 33360957 ~ 33361341 (+)
G392776 NA other downstream 984494 34147474 ~ 34150795 (+)
G394882 NA other downstream 2742132 35905112 ~ 35905781 (+)
G394910 NA other downstream 2803957 35966937 ~ 36004829 (+)
you2 you2 other downstream 2870280 36033260 ~ 36034806 (+)

Expression


Co-expression Network