Gene
RNA
| Item | Value |
|---|---|
| gene id | G396991 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048569.1 |
| NCBI id | CM023223.2 |
| chromosome length | 100798064 |
| location | 37966310 ~ 37966520 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU450486 | True | 211 | lncRNA | 0.40 | 1 | 37966310 | 37966520 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523757 | NA | coding | upstream | 1544 | 37943858 ~ 37964766 (+) |
| srsf9 | sfrs9 | coding | upstream | 45028 | 37917781 ~ 37921282 (+) |
| LOC110523754 | LOC106564246 | coding | upstream | 275550 | 37656590 ~ 37690760 (+) |
| trnaa-ugc-12 | NA | coding | upstream | 360060 | 37606177 ~ 37606250 (+) |
| LOC110523753 | LOC106564257 | coding | upstream | 361885 | 37591173 ~ 37604425 (+) |
| LOC110523762 | LOC106564143 | coding | downstream | 219741 | 38186261 ~ 38194092 (+) |
| cplane1 | cssa01h5orf42 | coding | downstream | 233994 | 38200514 ~ 38230167 (+) |
| LOC110523763 | wdr70 | coding | downstream | 263765 | 38230285 ~ 38316290 (+) |
| LOC110523766 | LOC106564097 | coding | downstream | 394646 | 38361166 ~ 38388097 (+) |
| opn4xa | opn4x1b2 | coding | downstream | 469926 | 38436446 ~ 38480684 (+) |
| G396979 | NA | non-coding | upstream | 12154 | 37937966 ~ 37954156 (+) |
| G396820 | NA | non-coding | upstream | 183371 | 37715634 ~ 37782939 (+) |
| G396744 | NA | non-coding | upstream | 378830 | 37587229 ~ 37587480 (+) |
| LOC110523751 | NA | non-coding | upstream | 394595 | 37569014 ~ 37572805 (+) |
| G396735 | NA | non-coding | upstream | 409753 | 37556251 ~ 37556557 (+) |
| LOC110522927 | LOC106565790 | non-coding | downstream | 2209 | 37964858 ~ 37974637 (+) |
| G396992 | NA | non-coding | downstream | 9991 | 37976511 ~ 37976790 (+) |
| G396994 | NA | non-coding | downstream | 11171 | 37977691 ~ 37978297 (+) |
| G396974 | NA | non-coding | downstream | 15696 | 37982216 ~ 37984991 (+) |
| G397002 | NA | non-coding | downstream | 29989 | 37996509 ~ 38018397 (+) |
| m17 | m17 | other | upstream | 555411 | 37409195 ~ 37411565 (+) |
| G396022 | kdm2b | other | upstream | 1000658 | 36965084 ~ 36965652 (+) |
| G395034 | NA | other | upstream | 1665020 | 36280300 ~ 36301290 (+) |
| G395005 | LOC106564805 | other | upstream | 1759694 | 36202901 ~ 36206616 (+) |
| LOC110523777 | LOC106563114 | other | downstream | 1347814 | 39297942 ~ 39317727 (+) |
| G399169 | gpat3 | other | downstream | 1795596 | 39762116 ~ 39765843 (+) |
| G399919 | NA | other | downstream | 2475235 | 40441755 ~ 40442086 (+) |
| G400154 | NA | other | downstream | 2898409 | 40864929 ~ 40881126 (+) |
| G400267 | LOC106561151 | other | downstream | 3139004 | 41105524 ~ 41106754 (+) |
