XLOC_023487


Basic Information

Item Value
gene id XLOC_023487
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 25750636 ~ 25754146 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00047203
TGAATCTGAACCGTTGGGCTTACACGTTTTGAAATTAGGTTAACCGGAAAGCTATCTGGAGATGGTGTTTTGAGGTGTTCATGCAAATTACATTGACATTCGATACTGATAAAGTTTCTGCGCACATAAGCCAACGCAGATCTACAGTAGGCCACAAGTTCAGCAGACTCGGAGTATAGACTAACATACTTTAAGGAACTACGACAACAAAATGAGGGCTCAGTATTGTTCTGAAGTCCGCTGACGCTGAACTGCGCAGTATTTTCTGTATGTACAGCATCACCTATGGGGTTTGGAAATGTGTGTTAGGGAATGACTGAAACTCTCCTCGCTCTAATGGACCGGCACAACAGCCACGGCTGCAGAATTGCTGACAGTCACCGCAAatttcttcctcctcctctgctTCTAATTAAATACACTGTCCTGTGCAGCAGCCCAGGCACACCGGCCAGCCTCAAACCTGCCATTTTTCACTCTTCATTCTGTACTGACACGCATGTGATGTGGTCTGAAATGCAGAACAGAGAAGAGAGAGGAGGGAGACATACAGTAGATGCACTCGCTGAGAGAAACACGTGTCTTTATGCTTCTCCACACATGCGTGTTTAATGTTTTGCCCTACATACAAGCTCCTGCACGTTCAAACTCATTTAGCGTTTGCACACTTTACAGTATATGGACAGTAAGTAATATCCAGAGACATATCAGTTTTGATGAAGGATTTGTGCACTTGGTTGTCCACTCTGTACTTCTAAAATAAGACTAATGCATACTCCCCTTACTACCCTGGTGGTAACCATAGTTTCTCCCAAAATATCAAGGCTGGTTAGTATGGTCCAGTGAGCTCCTGCTGTTGTATGTTGTAACTACAGCATCTGGTGGCAAATATCTTTTTTTCACTGACAGGGTTTAAAAATAGTTGTAGGTCTATATTCATATGCATATTGTTGTTCGTATTCTTAGAAAAATCttagacatgtttacatatttatgtgtgtgtttatactgaaaactgtaaaatgttag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00047203 True 1029 lncRNA 0.42 3 25750636 25754146

Neighbor

gene id symbol gene type direction distance location
XLOC_023486 chrnd coding downstream 59616 25683071 ~ 25691020 (-)
XLOC_023485 cnksr2a coding downstream 77194 25485264 ~ 25673442 (-)
XLOC_023484 mbtps2 coding downstream 289369 25447911 ~ 25461267 (-)
XLOC_023483 phex coding downstream 308290 25404358 ~ 25442346 (-)
XLOC_023482 ptchd1 coding downstream 385861 25347503 ~ 25364775 (-)
XLOC_023488 klhl24b coding upstream 6840 25760986 ~ 25788841 (-)
XLOC_023489 CR352209.2 coding upstream 251483 26005629 ~ 26025582 (-)
XLOC_023490 NA coding upstream 277102 26031248 ~ 26032271 (-)
XLOC_023491 NA coding upstream 478554 26232700 ~ 26236578 (-)
XLOC_023492 and1 coding upstream 523244 26277390 ~ 26283359 (-)
XLOC_023665 dre-mir-735 misc upstream 12423815 38177961 ~ 38178027 (-)
XLOC_023471 NA non-coding downstream 921235 24800776 ~ 24829401 (-)
XLOC_023468 NA non-coding downstream 1054879 24553793 ~ 24695757 (-)
XLOC_023466 NA non-coding downstream 1247614 24416324 ~ 24503022 (-)
XLOC_023467 NA non-coding downstream 1258119 24492203 ~ 24492517 (-)
XLOC_023461 NA non-coding downstream 1651757 24095316 ~ 24098879 (-)
XLOC_023496 NA non-coding upstream 600550 26354696 ~ 26369185 (-)
XLOC_023503 NA non-coding upstream 887753 26641899 ~ 26648023 (-)
XLOC_023507 NA non-coding upstream 1194566 26948712 ~ 26995164 (-)

Expression


Co-expression Network