XLOC_023674 (CU681836.2)


Basic Information

Item Value
gene id XLOC_023674
gene name CU681836.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 38446880 ~ 38447958 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00046718
TATAAGTACATaacttcactcacctgggaaatggaagccacgtgaatggtttgtgagcacaattaagtgcacacagcatgccatatcatctgataattataggaaataattccaaaaggcaactgactgtgtaaagccacataaaacatcacagaaatacaatgaatatgccgagttcagcagctaatcagctggaatcagctgaggtgaagtgaggGCGACAAACGAGACCTGGCTGTCACTCCAGTGGCCACGcctttaattatgcagacttaatatgtaatgtaatgtaaaacggatgagttataaaataattcaccccctcacagttttcatgaagggtaatattagctatatgaaccaaaattttTCTTTGTACCAGTCTGTAAAGAcatttttctgctgtaaagttggccatttcaacagtgggctcaatagaaatttgcttcATATGGAGCCTGGACTAGCGGaatttgatgaatt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095653

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00046718 True 483 processed_transcript 0.39 2 38446880 38447958

Neighbor

gene id symbol gene type direction distance location
XLOC_023673 CU681836.1 coding downstream 49392 38396572 ~ 38397488 (-)
XLOC_023672 lrrc4bb coding downstream 62448 38369351 ~ 38384432 (-)
XLOC_023671 zgc:91999 coding downstream 157997 38269088 ~ 38288883 (-)
XLOC_023670 NA coding downstream 194584 38241174 ~ 38252296 (-)
XLOC_023669 NA coding downstream 233953 38211103 ~ 38212927 (-)
XLOC_023675 FP102794.1 coding upstream 76035 38523993 ~ 38524619 (-)
XLOC_023676 NA coding upstream 88461 38536419 ~ 38548037 (-)
XLOC_023677 slc17a7b coding upstream 110031 38557989 ~ 38579066 (-)
XLOC_023678 NA coding upstream 154059 38602017 ~ 38609746 (-)
XLOC_023679 slc6a16b coding upstream 170544 38618502 ~ 38644937 (-)
XLOC_023665 dre-mir-735 misc downstream 268853 38177961 ~ 38178027 (-)
XLOC_023667 NA non-coding downstream 231398 38197838 ~ 38215482 (-)
XLOC_023660 BX001030.1 non-coding downstream 347205 38098896 ~ 38099675 (-)
XLOC_023681 NA non-coding upstream 217120 38665078 ~ 38671333 (-)
XLOC_023684 NA non-coding upstream 469688 38917646 ~ 38933203 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G312732 NA non-coding CI01000097 null 46379 ~ 48989 (+)