Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965125 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 18801955 ~ 18802033 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005052456.1 | True | 79 | mRNA | 0.41 | 1 | 18801955 | 18802033 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pcsk5b | pcsk5 | coding | downstream | 36056 | 18708690 ~ 18765899 (-) |
| LOC110525009 | gcnt1 | coding | downstream | 111998 | 18688289 ~ 18689957 (-) |
| LOC110525109 | LOC106585636 | coding | downstream | 156978 | 18614764 ~ 18644977 (-) |
| LOC110525387 | foxb2 | coding | downstream | 165064 | 18634736 ~ 18636891 (-) |
| LOC110525386 | vps13a | coding | downstream | 203797 | 18533624 ~ 18598158 (-) |
| LOC110525395 | glrx1 | coding | upstream | 79137 | 18881170 ~ 18882810 (-) |
| LOC110525110 | LOC106585703 | coding | upstream | 225248 | 19027281 ~ 19061822 (-) |
| LOC110525401 | LOC106585628 | coding | upstream | 285396 | 19087429 ~ 19091087 (-) |
| LOC110525402 | LOC106585704 | coding | upstream | 427630 | 19229663 ~ 19261466 (-) |
| LOC110525404 | LOC106585350 | coding | upstream | 510228 | 19312261 ~ 19324418 (-) |
| G482195 | NA | non-coding | downstream | 148909 | 18649962 ~ 18653046 (-) |
| G481767 | NA | non-coding | downstream | 428851 | 18372705 ~ 18373104 (-) |
| G481762 | NA | non-coding | downstream | 434289 | 18367430 ~ 18367666 (-) |
| G481724 | NA | non-coding | downstream | 504274 | 18297450 ~ 18297681 (-) |
| G481721 | NA | non-coding | downstream | 506459 | 18295297 ~ 18295496 (-) |
| G482281 | NA | non-coding | upstream | 38405 | 18840438 ~ 18841142 (-) |
| G482306 | NA | non-coding | upstream | 85337 | 18887370 ~ 18887602 (-) |
| G482309 | NA | non-coding | upstream | 87798 | 18889831 ~ 18890331 (-) |
| G482312 | NA | non-coding | upstream | 92608 | 18894641 ~ 18894901 (-) |
| LOC110525370 | LOC106585675 | other | downstream | 662301 | 18121017 ~ 18139654 (-) |
| git2a | LOC106585671 | other | downstream | 742570 | 18056651 ~ 18084926 (-) |
| G479533 | NA | other | downstream | 2208184 | 16589272 ~ 16593771 (-) |
| LOC110525318 | rxra | other | downstream | 2227974 | 16538121 ~ 16574149 (-) |
| G478734 | NA | other | downstream | 2918445 | 15881636 ~ 15883510 (-) |
| G482323 | NA | other | upstream | 155453 | 18957486 ~ 18963891 (-) |
| G482483 | NA | other | upstream | 389099 | 19191132 ~ 19191457 (-) |
| G482658 | NA | other | upstream | 508390 | 19310423 ~ 19310993 (-) |
| G482907 | LOC106585357 | other | upstream | 767174 | 19569207 ~ 19573427 (-) |
| G483145 | NA | other | upstream | 908042 | 19710075 ~ 19720616 (-) |
