LOC110525395 (glrx1)


Basic Information

Item Value
gene id LOC110525395
gene name glrx1
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 18881170 ~ 18882810 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110525395
ATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaacagtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGGTACTGCGATGAACAACATTTCACACTATTCTGTGCAAGGCTTCTTCTTGATACTGTGACTGTGTAGGGTATCAGTGCTAGCTCACCTGTTTTTCCACAcaacctctcatctctctgtccttctctgttTTGGCCACAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTAACCACTATCTTTTgtataaataaaataca
>TU548075
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAgtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548076
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaacagtgagtgagtgaatgcaTTTTTGTTTCGCTTTGTTATCCAGCCATTTCTAGACTTTTACTAGCCTGTTtttaactcccccccccccagaaggagccatataaaacatttatttcgTATATGGCAACCCTTCAAAGTACATAGAAGTAGCCTAATTTTGTTAGTGTATTCATACTTTAATTTTAGTCTTGCCACTGTCACTCAGCAAATGAGCCATGTTCAGAAAGGCGGGCAGGAGTTGCGCAAAAGGGGTTTGAAGCGCGCCTAACGCCGCGTGCACACAGACTGCATCATTACATTGCTGTACGGTAAATGTTAAGTAGTCTTCGCAATTTATGTACTGCATCAGAACAAACATAATCATGCTACACATTACACATTTATTCGGTGGTTTATCTATTTACGTGTCTGATACCGCACAGAAAAGCAACGCACAAACTGGACGAATCCAAAACACTGCTAGTCTGCATAATCTGCCAGgtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548077
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGgtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548078
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaacagtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548079
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaacagtgagtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548080
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaacagtgaAAAAGCAACGCACAAACTGGACGAATCCAAAACACTGCTAGTCTGCATAATCTGCCAGgtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548081
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGGTTGGAATCTATTCTGGCTATCGTTTCGCCAACTCTCTCTCAATTTCAGTCATAAATATTTACAATCTGTTGGAATACTCTATTCATAACGCTGCGGCTCTCTAAATAGCAACATGGCTCAGGAATTCGTTACGGCCAGAATTTAAGGGGACAAAGTAGTCGTGTTTCTAAAACCGTCATGCCCATATTGCGTAATGGCAAAATATGTTTTGTCAAAGTATGGATTTAATTGTCAAAGTATTGATTCAAATCTGGACACTTGGAATTCATAGACATCACTGGACGAGATGACATGAATGAAATCCAGGATTACCTAAATAAAATGACAGGTGAACgaagtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA
>TU548082
GCCTGTACGACCCCAGTGCAGCTGTAAACAAGAGTAAGgtgccACGGGTGTTCGTCGGTAAGGAGTGTGTTGGTGGGGGCAGTGATGTTAAAGCGCTGGATAAGAGTGGGAAACTGGAGGGAATGCTTAAGTCAATCGGATTGCTGCAATGATCTTCAGACAGCTGTGAATATCTGCACCACCTGGAAAACCCCTTGCCTTCGTTCTGTCTGCTGAACTGAGACCAAACATTGTGTGTCATCTATAGCTCTGATGTTAGTCACCCGTCTATCTTCATGACTGTAGGCCTGTCTCGGTTCCTCCAGTAATATTCCTCCAGTGATGTTTACATCCAAACATCTTTAAATCACTTA

Function

NR:

description
Glutaredoxin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110525395 False 710 mRNA 0.47 2 18881170 18882659
TU548075 False 348 lncRNA 0.47 3 18881199 18882810
TU548076 False 1171 lncRNA 0.42 3 18881199 18882810
TU548077 False 682 lncRNA 0.43 3 18881199 18882810
TU548078 False 693 lncRNA 0.43 3 18881199 18882810
TU548079 False 697 lncRNA 0.43 3 18881199 18882810
TU548080 False 755 lncRNA 0.43 4 18881199 18882810
TU548081 False 691 lncRNA 0.43 3 18881199 18882810
TU548082 True 353 lncRNA 0.47 3 18881199 18882810

Neighbor

gene id symbol gene type direction distance location
LOC110525392 LOC106585693 coding downstream 58136 18774930 ~ 18823034 (-)
LOC118965125 NA coding downstream 79137 18801955 ~ 18802033 (-)
pcsk5b pcsk5 coding downstream 115271 18708690 ~ 18765899 (-)
LOC110525009 gcnt1 coding downstream 191213 18688289 ~ 18689957 (-)
LOC110525109 LOC106585636 coding downstream 236193 18614764 ~ 18644977 (-)
LOC110525110 LOC106585703 coding upstream 144622 19027281 ~ 19061822 (-)
LOC110525401 LOC106585628 coding upstream 204770 19087429 ~ 19091087 (-)
LOC110525402 LOC106585704 coding upstream 347004 19229663 ~ 19261466 (-)
LOC110525404 LOC106585350 coding upstream 429602 19312261 ~ 19324418 (-)
LOC110525405 LOC106585351 coding upstream 490030 19372689 ~ 19379793 (-)
G482281 NA non-coding downstream 40028 18840438 ~ 18841142 (-)
G482195 NA non-coding downstream 228124 18649962 ~ 18653046 (-)
G481767 NA non-coding downstream 508066 18372705 ~ 18373104 (-)
G481762 NA non-coding downstream 513504 18367430 ~ 18367666 (-)
G481724 NA non-coding downstream 583489 18297450 ~ 18297681 (-)
G482306 NA non-coding upstream 4711 18887370 ~ 18887602 (-)
G482309 NA non-coding upstream 7172 18889831 ~ 18890331 (-)
G482312 NA non-coding upstream 11982 18894641 ~ 18894901 (-)
G482313 NA non-coding upstream 13174 18895833 ~ 18896066 (-)
G482336 NA non-coding upstream 41027 18923686 ~ 18923954 (-)
LOC110525370 LOC106585675 other downstream 741516 18121017 ~ 18139654 (-)
git2a LOC106585671 other downstream 821785 18056651 ~ 18084926 (-)
G479533 NA other downstream 2287399 16589272 ~ 16593771 (-)
LOC110525318 rxra other downstream 2307189 16538121 ~ 16574149 (-)
G478734 NA other downstream 2997660 15881636 ~ 15883510 (-)
G482323 NA other upstream 74827 18957486 ~ 18963891 (-)
G482483 NA other upstream 308473 19191132 ~ 19191457 (-)
G482658 NA other upstream 427764 19310423 ~ 19310993 (-)
G482907 LOC106585357 other upstream 686548 19569207 ~ 19573427 (-)
G483145 NA other upstream 827416 19710075 ~ 19720616 (-)

Expression


Co-expression Network