XLOC_024229


Basic Information

Item Value
gene id XLOC_024229
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007136.7
NCBI id CM002909.2
chromosome length 37502051
location 33029618 ~ 33036104 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049059
AGATTGACCCTGCAGATGTGGTTGTCATTTATTCACACAAATGTTTATCGATGGTGTTATCTTACAGAAGCAGAGTAAAGACCGGTTCGGTTTGGACGGGGATGAAGAATCCACCATGCTGGAAGAATCTGTATCGCCAAAAAAGTCCACCATCCTCCAGCAGCAGTTTAACCGGGTGGGTCGAGTCGAGCACGGGTCGGTGGCGCTGCCTGGCATCATGCGTTCAGGGTCAATAGGAGGCCCCGACACTTTCAACATGGGCACGATGCCCTCAGCCCAACAGCAAATCACCATGGGACAGATGCACAGAGGACACATGCCCCCTCTGGTCAGAAACCGCAACTGCACTGTTCTTTATGTTCATAGTTGAGTCAATAGAGCGGTTCTGCTTT

Function

GO:

id name namespace
GO:0051977 lysophospholipid transport biological_process
GO:1990379 lipid transport across blood-brain barrier biological_process
GO:0045056 transcytosis biological_process
GO:0051978 lysophospholipid molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049059 True 392 lncRNA 0.51 2 33029618 33036104

Neighbor

gene id symbol gene type direction distance location
XLOC_024228 CABZ01046980.1 coding upstream 13147 33002963 ~ 33016471 (+)
XLOC_024227 etfa coding upstream 242371 32755485 ~ 32787247 (+)
XLOC_024226 scaper coding upstream 289894 32525131 ~ 32739724 (+)
XLOC_024225 ctdspl2a coding upstream 510203 32496723 ~ 32519415 (+)
XLOC_024224 sqor coding upstream 534255 32473277 ~ 32495363 (+)
XLOC_024231 dre-mir-190a coding downstream 102971 33139075 ~ 33139200 (+)
XLOC_024232 tpm1 coding downstream 156300 33192404 ~ 33250323 (+)
XLOC_024233 lactb coding downstream 219908 33256012 ~ 33266553 (+)
XLOC_024234 NA coding downstream 308690 33344794 ~ 33348735 (+)
XLOC_024235 NA coding downstream 371016 33407120 ~ 33439620 (+)
XLOC_023973 CR762411.1 misc upstream 17811509 15217824 ~ 15218109 (+)
XLOC_024218 NA non-coding upstream 1526149 31497318 ~ 31503469 (+)
XLOC_024216 NA non-coding upstream 1633937 31388117 ~ 31395681 (+)
XLOC_024212 NA non-coding upstream 1770735 31248998 ~ 31258883 (+)
XLOC_024208 CR381618.3 non-coding upstream 2048171 30981333 ~ 30981447 (+)
XLOC_024207 CR381618.2 non-coding upstream 2057658 30971844 ~ 30971960 (+)
XLOC_024236 NA non-coding downstream 465241 33501345 ~ 33503564 (+)
XLOC_024237 NA non-coding downstream 569497 33605601 ~ 33609953 (+)
XLOC_024206 CR381618.1 non-coding upstream 1988893 30915178 ~ 31040725 (+)

Expression


Co-expression Network