G497060


Basic Information

Item Value
gene id G497060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 32297254 ~ 32375937 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU564730
gtgtatttcagaATATAAATACACTCCATATTTtagagcacactataaggagtatacactgagtgtacaacacattaggaacacctgctatttccatgacacagactgaccaggtgaatccaggtgaaagctatgatcccttattgatgtcacttgttaaattcacttcaatcagtgtagatgaagaggaggagacaggttaaagaaggattttaatgctttgagacaattgagacatggattgtgtatgtgtgccattcagagtgtgaatgtgcaagacaaaatatttaagtggctttgaacagggtatggtagtagttgccagttgcaccggtttgtgtcaagaactgcaacgctgctgggtttttcacactcaacagtttcccgtgtgtaagaatggtccaccacccaaaggacaataAGCCAACTTTACAGAACTTGGGGTCAACCtggcccagcatccctgtgaaacacTTTCTACACCTTGCAAAGTCCAtgcctgatgaattgaggctgttctgagggcaactcaatactaggaaggtgctcttaatgtttcGTACACTCACTGTATATGATTAATAATTAAGTCAAAAGAatgatgtagcaactacagattgcaactttaagtctatcaaaagtggcGAGTTTGAGCATGTTTCCATTAGGCATATGGAAAAATGTTTTATCAACacgaattagattgagcaatagaATCCCGACTTGTGGTCTTCTTAAATTAAACTTGTTTTTGACGGTATGGAGCACAACACCAGAGAGGACTATAGAAGGGAGGAACTCCCTCAAACTTTTATTCCATAAGCTGGGATCCGCAATATTtagctgttgcaagagcgcattttcAATGGCTGTCCACTGGTTGCAAAAACAATGATTGGTAGGCAGCTTATTTAATTCAACCATTACTGggttaaataacacatataggCTAAATgacagagcagcagtgtgattcacatccaTGCATAAGTAGCCAACAGTAGATAGCAAAAATAGTTGATATCCCTTAGCTATCGCCCAtaggctacaccactgctgtcatccttacctccaagagTTTATTCAAATTGGATATTCTTTAGaagccgacagcagtcgcaccattggaagacatatcTTCGACTGTTGCCTACAAAAGCATATTCCTGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564730 True 1170 lncRNA 0.40 2 32297254 32375937

Neighbor

gene id symbol gene type direction distance location
slc14a2 LOC106585019 coding downstream 23107 32260346 ~ 32274147 (-)
LOC110525023 NA coding downstream 216488 32074123 ~ 32080766 (-)
epg5 epg5 coding downstream 225407 32049187 ~ 32071847 (-)
LOC110517556 dnajb5 coding downstream 263584 32021741 ~ 32033670 (-)
LOC110525767 LOC106584919 coding downstream 312565 31973832 ~ 31984689 (-)
thbs4a LOC106585023 coding upstream 93375 32469312 ~ 32482950 (-)
LOC110526888 LOC106585027 coding upstream 132743 32508680 ~ 32520900 (-)
LOC110525784 LOC106585031 coding upstream 304100 32680037 ~ 32682899 (-)
LOC110525785 LOC106585030 coding upstream 314770 32690707 ~ 32730676 (-)
LOC110525787 LOC106585035 coding upstream 374728 32750665 ~ 32759951 (-)
G497050 NA non-coding downstream 9450 32287511 ~ 32287804 (-)
G497032 NA non-coding downstream 46741 32246193 ~ 32250513 (-)
G497021 NA non-coding downstream 68861 32227029 ~ 32228393 (-)
G497013 NA non-coding downstream 93879 32201806 ~ 32203375 (-)
G496993 NA non-coding downstream 108147 32155680 ~ 32189107 (-)
G497112 NA non-coding upstream 12279 32388216 ~ 32388472 (-)
G497116 NA non-coding upstream 13603 32389540 ~ 32389761 (-)
G497427 NA non-coding upstream 34653 32410590 ~ 32410895 (-)
G497428 NA non-coding upstream 35000 32410937 ~ 32411181 (-)
G496851 NA other downstream 404605 31843463 ~ 31892649 (-)
G496777 NA other downstream 625327 31670978 ~ 31671927 (-)
G496772 NA other downstream 635636 31661393 ~ 31661618 (-)
G495560 NA other downstream 1721681 30575118 ~ 30575573 (-)
G495554 NA other downstream 1747804 30545402 ~ 30549450 (-)
G498484 rpl6 other upstream 951570 33327507 ~ 33330504 (-)
LOC110525812 LOC103397138 other upstream 956713 33332650 ~ 33336818 (-)
G498960 NA other upstream 1664422 34040359 ~ 34041174 (-)
G501142 NA other upstream 3389429 35765366 ~ 35767929 (-)

Expression


Co-expression Network