G513161



Basic Information


Item Value
gene id G513161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 45797178 ~ 45797412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU582202
GGCGCAacactatctgtgtgggtggaccatttcagtttgttagtgacgtgtacgccgaggaacttaaaactttccactttctccactgctgtccagtcaatgtggataggggagtgctccctctactgtctcctgaaatccacaataatctcctttgttttgttgacattgagtgagaggttattttcctggcaccacacttccagagccctcacctcctccctgtaggctatct

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU582202 True 235 lncRNA 0.48 1 45797178 45797412

Neighbor


gene id symbol gene type direction distance location
LOC118965028 NA coding downstream 22250 45765669 ~ 45774928 (-)
LOC110526035 LOC105889509 coding downstream 54083 45655985 ~ 45743095 (-)
kremen1 kremen1 coding downstream 243804 45437334 ~ 45553374 (-)
coq5 coq5 coding downstream 378334 45414975 ~ 45418844 (-)
znrf3 LOC106584905 coding downstream 412328 45270568 ~ 45384850 (-)
LOC110526037 LOC106584895 coding upstream 53818 45851230 ~ 45863241 (-)
LOC100136024 LOC100136024 coding upstream 106639 45904051 ~ 45907159 (-)
LOC110526038 LOC106584879 coding upstream 118360 45915772 ~ 45954751 (-)
LOC110526039 NA coding upstream 176361 45973773 ~ 45995386 (-)
apba1a apba1 coding upstream 465709 46263121 ~ 46360886 (-)
G513159 NA non-coding downstream 1034 45795802 ~ 45796144 (-)
G513123 NA non-coding downstream 44283 45752667 ~ 45752895 (-)
G513122 NA non-coding downstream 44806 45751909 ~ 45752372 (-)
G513114 NA non-coding downstream 51774 45745202 ~ 45745404 (-)
G513163 NA non-coding upstream 2048 45799460 ~ 45799729 (-)
G513169 NA non-coding upstream 8322 45805734 ~ 45805966 (-)
G513773 NA non-coding upstream 150630 45948042 ~ 45979860 (-)
G513925 NA non-coding upstream 340746 46138158 ~ 46140055 (-)
G513940 NA non-coding upstream 369178 46166590 ~ 46166796 (-)
nf2a nf2 other downstream 1585355 44209338 ~ 44272386 (-)
prodhb LOC100194675 other downstream 1848789 43940790 ~ 43955257 (-)
G510310 NA other downstream 2273070 43523714 ~ 43524108 (-)
G509952 NA other downstream 2671791 43124581 ~ 43125387 (-)
LOC110526044 LOC107699739 other upstream 573278 46367701 ~ 46430607 (-)
G514434 NA other upstream 1113246 46910658 ~ 46910950 (-)
G514777 NA other upstream 1218750 47016162 ~ 47016496 (-)
G515094 LOC106585477 other upstream 2177381 47974793 ~ 47976975 (-)

Expression



Co-expression Network