G515094 (LOC106585477)


Basic Information

Item Value
gene id G515094
gene name LOC106585477
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048570.1
NCBI id CM023224.2
chromosome length 101096859
location 47974793 ~ 47976975 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU584295
ACCTAGGACTGATATTGACCTCTTATTTATCCACCAGAGCGTGAAATGGGAGGATCCCCCGGATGACCAAAATAAAGTCGTGGAGAACATGAAGGATGAAACAGAGACACACGAGACCAACaagaacaggacaggaggcaagAGTCTTCTCAGACACCCGGGTGTGGTTTCCGGGAAAGGGGATCTATCATTgagcagctggagaaggaggctcagaggactctaatgccttctctcaagattgggacatgctgtgccccaatactcctctccttcctgaggagtCTAACTGATGAccaatggagagtgattcagcagggcatgaaaaataatctcacattcgagcagctctccatgctgtgtctgaagattgttaaagtcgtgacccagacagccctccgcattctcctaccagcgctagctcgtatcatgggggtgaacctgaggagtggggcaacctccccagaatcccagtgctctctgacagggtctgaggattccttaggcggtctggatgagagagagaaaaggctgctgatcagtgagatgaactactggactaaggagaggaggaggaatggcagtgcaggatgccgccaaaaatCCACTTGCAGGACCTCATCACCATGCTGTTCGCCTAAGAGGTCCCAGACCTCATTGCAGAGCTTGCCTGCAACTAGAGAGGCTCCCCTCATGGAGGCGCCTCTGAAGGCTCTTTTTGGGGTAACGGAAGAGAGCCTTCTGATATCCCTGGTTGAGGGTCACTCcaaccacacctcctcctccagctcctccgagTTGAGCTGTGCTATCGTGGGGGAGGTGGTACACCAGCTTAACTCTGGCCTCTCAGTGGCCATTCAGGCCAGCCCGGGGAGTTGCCCCCCTATGGACAGTCAGGACATAGCAGCAGGCAAGGAGGTCATTCGGGTAGCCTCGGTTCAGATCCT

Function

NR:

description
uncharacterized protein LOC110525362

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU584295 True 950 TUCP 0.54 5 47974793 47976975

Neighbor

gene id symbol gene type direction distance location
LOC118964890 NA coding downstream 40476 47933538 ~ 47934317 (-)
LOC118964882 NA coding downstream 285541 47688651 ~ 47689252 (-)
LOC118964884 LOC106585477 coding downstream 308269 47665814 ~ 47667571 (-)
LOC118964883 LOC106585477 coding downstream 440267 47533816 ~ 47534526 (-)
LOC118964878 LOC106585477 coding downstream 463783 47507163 ~ 47511010 (-)
LOC118965031 LOC106585477 coding upstream 39329 48016304 ~ 48017854 (-)
LOC110512142 LOC106585477 coding upstream 320542 48292846 ~ 48318495 (-)
LOC118965032 LOC106585477 coding upstream 369889 48346864 ~ 48348019 (-)
LOC118964894 NA coding upstream 371734 48348709 ~ 48353264 (-)
LOC118964892 LOC106585477 coding upstream 401410 48375946 ~ 48387076 (-)
G515067 NA non-coding downstream 31793 47942749 ~ 47943000 (-)
G515064 NA non-coding downstream 248543 47726033 ~ 47726250 (-)
G515060 NA non-coding downstream 253304 47721224 ~ 47721489 (-)
G515058 NA non-coding downstream 257945 47716037 ~ 47716848 (-)
G515049 NA non-coding downstream 272264 47702308 ~ 47702529 (-)
G515099 NA non-coding upstream 10159 47987134 ~ 47987356 (-)
G515103 NA non-coding upstream 17514 47994489 ~ 47994807 (-)
G515104 NA non-coding upstream 19834 47996809 ~ 47997066 (-)
G515121 NA non-coding upstream 281356 48258331 ~ 48286378 (-)
G515123 NA non-coding upstream 288195 48265170 ~ 48266108 (-)
G514777 NA other downstream 958297 47016162 ~ 47016496 (-)
G514434 NA other downstream 1063843 46910658 ~ 46910950 (-)
LOC110526044 LOC107699739 other downstream 1544433 46367701 ~ 46430607 (-)
apba1a apba1 other downstream 1613907 46263121 ~ 46360886 (-)
znrf3 LOC106584905 other downstream 2698406 45270568 ~ 45384850 (-)
G515122 LOC106585477 other upstream 287018 48263993 ~ 48264977 (-)
G515139 LOC106585477 other upstream 342772 48319747 ~ 48320588 (-)
prdm12b LOC106587007 other upstream 650063 48625747 ~ 48630388 (-)

Expression


Co-expression Network