Gene
RNA
| Item | Value |
|---|---|
| gene id | G515099 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 47987134 ~ 47987356 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU584301 | True | 223 | lncRNA | 0.38 | 1 | 47987134 | 47987356 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511762 | NA | coding | downstream | 1483 | 47943033 ~ 47985651 (-) |
| LOC110513487 | LOC106585477 | coding | downstream | 11486 | 47948315 ~ 47975648 (-) |
| LOC118964890 | NA | coding | downstream | 52817 | 47933538 ~ 47934317 (-) |
| LOC118964882 | NA | coding | downstream | 297882 | 47688651 ~ 47689252 (-) |
| LOC118964884 | LOC106585477 | coding | downstream | 320610 | 47665814 ~ 47667571 (-) |
| LOC118965031 | LOC106585477 | coding | upstream | 28948 | 48016304 ~ 48017854 (-) |
| LOC110512142 | LOC106585477 | coding | upstream | 310161 | 48292846 ~ 48318495 (-) |
| LOC118965032 | LOC106585477 | coding | upstream | 359508 | 48346864 ~ 48348019 (-) |
| LOC118964894 | NA | coding | upstream | 361353 | 48348709 ~ 48353264 (-) |
| LOC118964892 | LOC106585477 | coding | upstream | 391029 | 48375946 ~ 48387076 (-) |
| G515067 | NA | non-coding | downstream | 44134 | 47942749 ~ 47943000 (-) |
| G515064 | NA | non-coding | downstream | 260884 | 47726033 ~ 47726250 (-) |
| G515060 | NA | non-coding | downstream | 265645 | 47721224 ~ 47721489 (-) |
| G515058 | NA | non-coding | downstream | 270286 | 47716037 ~ 47716848 (-) |
| G515103 | NA | non-coding | upstream | 7133 | 47994489 ~ 47994807 (-) |
| G515104 | NA | non-coding | upstream | 9453 | 47996809 ~ 47997066 (-) |
| G515121 | NA | non-coding | upstream | 270975 | 48258331 ~ 48286378 (-) |
| G515123 | NA | non-coding | upstream | 277814 | 48265170 ~ 48266108 (-) |
| G515128 | LOC106585477 | non-coding | upstream | 302813 | 48290169 ~ 48290686 (-) |
| G515094 | LOC106585477 | other | downstream | 10159 | 47974793 ~ 47976975 (-) |
| G514777 | NA | other | downstream | 970638 | 47016162 ~ 47016496 (-) |
| G514434 | NA | other | downstream | 1076184 | 46910658 ~ 46910950 (-) |
| LOC110526044 | LOC107699739 | other | downstream | 1556774 | 46367701 ~ 46430607 (-) |
| apba1a | apba1 | other | downstream | 1626248 | 46263121 ~ 46360886 (-) |
| G515122 | LOC106585477 | other | upstream | 276637 | 48263993 ~ 48264977 (-) |
| G515139 | LOC106585477 | other | upstream | 332391 | 48319747 ~ 48320588 (-) |
| prdm12b | LOC106587007 | other | upstream | 639682 | 48625747 ~ 48630388 (-) |
