XLOC_025263 (BX936284.1)


Basic Information

Item Value
gene id XLOC_025263
gene name BX936284.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 20913310 ~ 20915154 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00049875
tgctgcagtaaaaaggtttcatgtgaagtacatatatagtatgggatgtgctgtataagaactgaccattgttatttttctacttatttaaaatgcggtctttatagtattttatattatgttaataccccatctctttaaaatgctgcagtaaaaagatTTACATTGAATTACACATATactatgggatgtcctgtataagaactgaccattgttttttctacttatttaaaataaactctttatagtactttatattattttaataccccgtttctttaaaatgctgcagtaaaaagcttttatgtgaagtacacacatagattaggatgtcctgtataagatctgaccattgtttttttctacttatttgaattgggttttttatagcactttaaaatatgttaataccctgttccTCCAAAACACTGTAGTTAAAAGTTTTCTTGTGTAGTAAagatatagtatggtatgtcctgtataagaactgaccattgttttttcctacttatttgaaatgtagtctttatagcactttttatTAGGTCATTAGCCCGTTTCtctaaaacagtgcagtaaaaagatTTCATATTAAGTACACATATAGCATAGGATGTTCTGTACAGGAACTGATCATTGTTTTTGTCTACTTATTGTAAATTGGGTCTTTATAACACTGAGTAATGTTAAtacccaatttctccaaaacactgcagtaacaagtctttattTGAAGTTTAGAATGTGATGTCCTGTATCAgacctgactattgttttttctacatattttaaatgagcaatttttttccaaattgctgaagtaaaaagtattcagatgtagtatatatgcatatagcatGGGACATCCAGTATCGAACCAGATCagtcttttatttaacttatgtCAAACAATGTATTTATAGCACTTTAAAGACTTTATAGCTCAATAATAgcacatttctccaaaatgctgcagtaagttaTTATGAGGTATGCATATAATATTGGATGTCCTGTCCATTGTTTTCTTCTGCTCACCTAAATGAGGTCTTTTACATGAGGTATGCATGTACATCCTGTATCAGaaccaaactttgtttttttctacttatttttttatagcactttaaagcgtgttaatggtacatttctccaaaatactgcagtaaaacaggcttcatatgatgtatgcttagtatttgacttcctgcatcagatcttattgttgttctattctacttataacaaataataaggtctttacagtcatctaaagtgtaataatgccccatatcccatatactgaaagaagcataaccttttaaatcccctttaaatgaaataaacataaatttgtaattcaaacaatgttttgttggactactttatgattgttttcactTTCTGAGGTTAGCCACGTTGTATAAAATTGCATTCAACCTTATTTGCAATGTACTGTAGTTGGTTAGGAGAAGTAGAAACGCATTCTGTGTATTTAGAAATCGTATATTTATTCTGTCCGTTTGATCTgctataaaatcatttgaagcaaaaagataaacttgaggaaattaaaggtaagcccagaaaccaatttcttaaaataacaacagtCAAAAAAAGCTAATGAATTGTTTAATAAAGCATTCGTGGGAGGAAAGGGGGATAAACTTATATATCGTTGTCTCTGTTCTGGGCGAAATG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104512

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00049875 True 1704 lncRNA 0.31 2 20913310 20915154

Neighbor

gene id symbol gene type direction distance location
XLOC_025262 BX248239.1 coding upstream 233272 20679923 ~ 20680038 (+)
XLOC_025261 NA coding upstream 403797 20491202 ~ 20509513 (+)
XLOC_025260 nxph3 coding upstream 451608 20404912 ~ 20461702 (+)
XLOC_025258 ngfra coding upstream 681529 20156956 ~ 20231781 (+)
XLOC_025259 NA coding upstream 714691 20198302 ~ 20198619 (+)
XLOC_025264 zwi coding downstream 109999 21025153 ~ 21030873 (+)
XLOC_025265 NA coding downstream 142700 21057854 ~ 21066838 (+)
XLOC_025266 NA coding downstream 221941 21137095 ~ 21143371 (+)
XLOC_025267 zgc:123295 coding downstream 274612 21189766 ~ 21198744 (+)
XLOC_025268 zgc:112038 coding downstream 285609 21200763 ~ 21218133 (+)
XLOC_025429 BX649540.1 misc downstream 9333585 30248739 ~ 30249036 (+)
XLOC_025257 NA non-coding upstream 848578 20059678 ~ 20064732 (+)
XLOC_025248 NA non-coding upstream 1440113 19472963 ~ 19473197 (+)
XLOC_025270 NA non-coding downstream 330743 21245897 ~ 21251807 (+)
XLOC_025271 NA non-coding downstream 397430 21312584 ~ 21320485 (+)

Expression


Co-expression Network