XLOC_025508 (CR392003.1)


Basic Information

Item Value
gene id XLOC_025508
gene name CR392003.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 33045883 ~ 33048390 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050297
CCCATTCAAGCACTGGAGCAGAGAGCGTTGTCATGGAAACGGAGCAACGACACGACACCTGACCGTCAACAGCACTTTTCTCATGCGGCAGTTTTCACtaatttcagtgctCTGTGGTTTCAGAAGTGACAAAATTACCCCTACAACAGAAGAGAAGAGCCAAGATGAAGGGAGCTAATCACAGAGCTGGAGGAAACACAGATTTTGGATCGTCCTCCACTCACTCTACCACTTTGTTTTTTCCTTGCCAGACTTCATTTAAGGATAAGAAAGAAGCCTGCTACAAGAGAGACAGCGGAAGGGAGCCTCAAAGACATTTTTATTAGGATCTGCTAATCATGAGGGGGCAGACAAAAGAACctgcattttccttcagcttaatatcagaggtcaccacagcgtaagGAACTGGATAttactttggcatatgttttacacagcggatggccttccagctgcaacccagcactgtgaaacacccatacactctcgtatTCACAGACACTTCTACACTATgttcaaattcacctatagcacaagtgtttggactgtggtggaaacccacaccaaaacagggagaacatgcaaactccacacagaaatgccagcggacccagccgggactcataccagcaacctttttgctgtgaggtgacagtctgagccactgtgctgccccagtGTAGTTGTTAATAACCTCCAGATGTTTTAGTTTGATTTTGTAATATTAATGCACGTTTACATTTATTGTAATatgtatgttaatatttattcacaatgtaatttatttttatgttatttataataacGTTAAATGTCATAAGaatgttataatttattataatattataataaataattataataatgttaaaatataaatacaaatttatttataatgtttttaatagtttatttttataatgagaaGTCTCAAAGTCTGTCTTTATTATAGAAAACTCATTGTTGAATGGCtaccactttacaataaggttgtatgtattagttaatgtatttactaacataataaacaatacatttactacagtatttattcatctttgctaatgttggtaaatg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097431

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050297 True 1080 processed_transcript 0.37 4 33045883 33048390

Neighbor

gene id symbol gene type direction distance location
XLOC_025507 NA coding upstream 861 33043644 ~ 33045022 (+)
XLOC_025506 NA coding upstream 2333 33041307 ~ 33043550 (+)
XLOC_025505 NA coding upstream 16856 32976882 ~ 33029027 (+)
XLOC_025504 nbr1b coding upstream 93833 32933663 ~ 32952050 (+)
XLOC_025503 zgc:162613 coding upstream 175828 32862730 ~ 32870055 (+)
XLOC_025509 NA coding downstream 144978 33193368 ~ 33194715 (+)
XLOC_025510 hspb9 coding downstream 252132 33300522 ~ 33301321 (+)
XLOC_025511 pyya coding downstream 292549 33340939 ~ 33344780 (+)
XLOC_025512 mpp2a coding downstream 296957 33345347 ~ 33379440 (+)
XLOC_025513 CABZ01012962.1 coding downstream 335892 33384282 ~ 33419664 (+)
XLOC_025429 BX649540.1 misc upstream 2796847 30248739 ~ 30249036 (+)
XLOC_025492 NA non-coding upstream 387447 32651697 ~ 32658436 (+)
XLOC_025487 FP236454.1 non-coding upstream 474512 32571309 ~ 32571371 (+)
XLOC_025514 CR396582.1 non-coding downstream 359198 33407588 ~ 33407710 (+)
XLOC_025516 CR396582.2 non-coding downstream 401710 33450100 ~ 33450219 (+)
XLOC_025517 NA non-coding downstream 511702 33560092 ~ 33573516 (+)

Expression


Co-expression Network