LOC110529271 (ei2bb)


Basic Information

Item Value
gene id LOC110529271
gene name ei2bb
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 4582547 ~ 4590496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984594.1
ACCACCGTGGGCAACATGGTACTGCGTGTCCTCAAGATCATCAGGGAGGAATATGCCAGGTGGGTTTATCATCAGGGAGGAGGAATATGCCAGGGTAGTTTATCATCGGGGAGGAGGAATATGCCAGGTGAGTTTATCATCAGGGAGGAGGAATATGCCAGGGTAGTTTATCATCGGGGAGGAGGAATATGCCAGGTGAGTTTATCATCAGGGAGGAGGAATATGCCAGGGTAGTTTATCATCGGGGAGGAGGAATATGCCAGGTGAGTTTATCATCAGGGAGGAGGAATATGCCAGGTGAGTTTATCATCAGGGAGGAGGAATATGCCAGGTCTCGTGGTAGCAGCGAGGAGACAGACCAGCAGGAATCCCTTCACAAGTTGCTAACGTCAGGGGGGCTGAGCGAGGAGAACTTCAGACAACACTTTGTTCATCTCAAAGCTAATGTCATAGAGGCCATCAATGAACTCCTCACAGAGCTAGaGGGCACCACGGACAACATCGCCATGCAGGCCCTGGAGCACATCCACTCCAACGAGGTCATCATGACTGTCGGCCGCTCGCGCACCGTCGAGGCCTTCCTCAAAGACGCAGCGAGGAAACGCAAGTTCCACGTCATCGTGGCCGAGTGTGCCCCCTTCTGCCAGGGTCATGAAATGGCTACTAATCTCTCCAAAGCCAGCATCGAGACCACTGTAATAGCAGACGCCGCCATATTTGCAGTGATGTCCCGAGTGAATAAGGTCATCATCGGAACACAGACGGTTCTGGCCAATGGCGGGCTCAGGGCGGTCAACGGAACCCACACTGTAGCTCTAGCAGCCAGGCACCACTCGACTCCGCTCATCGTCTGCGCTCCCATGTTCAAGCTCTCTCCTCAGTTTCCCAATGAAGAGGACACATTCCATAAGTTTGTCTCCCCACACGAGGTGCTTCCCTTCACCGAAGGAGAGATTCTATCCAAGGTGAACGTGCACTGCCCAGTGTTCGACTACGTTCCTCCTGAACTCATCACTCTGTTCATCTCTAACATCGGCGGCAACGCTCCCTCTTACATCTACCGGCTGATGAGTGAGCTCTACCACCCTGAGGACCACGACCTGTAATGATATGCAGACAATActcaataataaataaataaaaaagg
>XM_036984593.1
atagagatagatagagtacTCCTCTTTATATTTGTTCCACTACGGCATCTGTgagagcatgggcagcgccattgaggctaaAACCCATAAGAAGCCTCACCCAATGAACTGCTTTAAAATATCGGAAGCATGGCGGAAGCCCTAAATGGCGCTGCCCGTGCTAAAAGTTCATGCTAAAATTGCCTTTTGGCTACTAGAGATCTCTATCATTTTCTATGTCGACAACATCAACTTGTTTTGATAAAGCATCGAGTTAACGTCAGCTGGTGAATTCAGATAACAGTATGCCTGGGGCTGACAAAGAAGCAGATTTAACAGAGCGAATTGAGGCTTTTCTGGCCGATTTAAAGCGGGGAGGTTGTGGGACAGGACCGATCCGAGGGTCGGGAGAAACCGCCAGAGAAACGACAGCTTTGCTCCGGAAAGTAACAGCCCAGGCACGATGGAGCAGCGCAGGCGACCTGATGGAAATTATTCGcaaggaagggaggaggatgacAGCCGCCCAGCCGTCTGAGACCACCGTGGGCAACATGGTACTGCGTGTCCTCAAGATCATCAGGGAGGAATATGCCAGGTCTCGTGGTAGCAGCGAGGAGACAGACCAGCAGGAATCCCTTCACAAGTTGCTAACGTCAGGGGGGCTGAGCGAGGAGAACTTCAGACAACACTTTGTTCATCTCAAAGCTAATGTCATAGAGGCCATCAATGAACTCCTCACAGAGCTAGaGGGCACCACGGACAACATCGCCATGCAGGCCCTGGAGCACATCCACTCCAACGAGGTCATCATGACTGTCGGCCGCTCGCGCACCGTCGAGGCCTTCCTCAAAGACGCAGCGAGGAAACGCAAGTTCCACGTCATCGTGGCCGAGTGTGCCCCCTTCTGCCAGGGTCATGAAATGGCTACTAATCTCTCCAAAGCCAGCATCGAGACCACTGTAATAGCAGACGCCGCCATATTTGCAGTGATGTCCCGAGTGAATAAGGTCATCATCGGAACACAGACGGTTCTGGCCAATGGCGGGCTCAGGGCGGTCAACGGAACCCACACTGTAGCTCTAGCAGCCAGGCACCACTCGACTCCGCTCATCGTCTGCGCTCCCATGTTCAAGCTCTCTCCTCAGTTTCCCAATGAAGAGGACACATTCCATAAGTTTGTCTCCCCACACGAGGTGCTTCCCTTCACCGAAGGAGAGATTCTATCCAAGGTGAACGTGCACTGCCCAGTGTTCGACTACGTTCCTCCTGAACTCATCACTCTGTTCATCTCTAACATCGGCGGCAACGCTCCCTCTTACATCTACCGGCTGATGAGTGAGCTCTACCACCCTGAGGACCACGACCTGTAATGATATGCAGACAATActcaataataaataaataaaaaagg
>XM_021611388.2
accatagagatagatagagtacTCCTCTTTATATTTGTTCCACTACGGCATCTGTgagagcatgggcagcgccattgaggctaaAACCCATAAGAAGCCTCACCCAATGAACTGCTTTAAAATATCGGAAGCATGGCGGAAGCCCTAAATGGCGCTGCCCGTGCTAAAAGTTCATGCTAAAATTGCCTTTTGGCTACTAGAGATCTCTATCATTTTCTATGTCGACAACATCAACTTGTTTTGATAAAGCATCGAGTTAACGTCAGCTGGTGAATTCAGATAACAGTATGCCTGGGGCTGACAAAGAAGCAGATTTAACAGAGCGAATTGAGGCTTTTCTGGCCGATTTAAAGCGGGGAGGTTGTGGGACAGGACCGATCCGAGGGTCGGGAGAAACCGCCAGAGAAACGACAGCTTTGCTCCGGAAAGTAACAGCCCAGGCACGATGGAGCAGCGCAGGCGACCTGATGGAAATTATTCGcaaggaagggaggaggatgacAGCCGCCCAGCCGTCTGAGACCACCGTGGGCAACATGGTACTGCGTGTCCTCAAGATCATCAGGGAGGAATATGCCAGGTCTCGTGGTAGCAGCGAGGAGACAGACCAGCAGGAATCCCTTCACAAGTTGCTAACGTCAGGGGGGCTGAGCGAGGAGAACTTCAGACAACACTTTGTTCATCTCAAAGCTAATGTCATAGAGGCCATCAATGAACTCCTCACAGAGCTAGaGGGCACCACGGACAACATCGCCATGCAGGCCCTGGAGCACATCCACTCCAACGAGGTCATCATGACTGTCGGCCGCTCGCGCACCGTCGAGGCCTTCCTCAAAGACGCAGCGAGGAAACGCAAGTTCCACGTCATCGTGGCCGAGTGTGCCCCCTTCTGCCAGGGTCATGAAATGGCTACTAATCTCTCCAAAGCCAGCATCGAGACCACTGTAATAGCAGACGCCGCCATATTTGCAGTGATGTCCCGAGTGAATAAGGTCATCATCGGAACACAGACGGTTCTGGCCAATGGCGGGCTCAGGGCGGTCAACGGAACCCACACTGTAGCTCTAGCAGCCAGGCACCACTCGACTCCGCTCATCGTCTGCGCTCCCATGTTCAAGCTCTCTCCTCAGTTTCCCAATGAAGAGGACACATTCCATAAGTTTGTCTCCCCACACGAGGTGCTTCCCTTCACCGAAGGAGAGATTCTATCCAAGGTGAACGTGCACTGCCCAGTGTTCGACATGTGACTTTACTCTGTTTCTCTGTAGGAGAGATTCTATCCAAGGTGA

Function

NR:

description
translation initiation factor eIF-2B subunit beta

GO:

id name namespace
GO:0019509 L-methionine salvage from methylthioadenosine biological_process
GO:0051716 cellular response to stimulus biological_process
GO:0043087 regulation of GTPase activity biological_process
GO:0006446 regulation of translational initiation biological_process
GO:0042552 myelination biological_process
GO:0014003 oligodendrocyte development biological_process
GO:0005851 eukaryotic translation initiation factor 2B complex cellular_component
GO:0046523 S-methyl-5-thioribose-1-phosphate isomerase activity molecular_function
GO:0005085 guanyl-nucleotide exchange factor activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0005525 GTP binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984594.1 False 1147 mRNA 0.52 8 4582547 4589667
XM_036984593.1 False 1393 mRNA 0.52 8 4582547 4590493
XM_021611388.2 True 1289 mRNA 0.52 8 4582725 4590496

Neighbor

gene id symbol gene type direction distance location
LOC110529162 ptk2b coding downstream 224391 4279536 ~ 4358156 (-)
baalcb LOC106571017 coding downstream 534746 4037616 ~ 4047801 (-)
LOC110529266 LOC106571016 coding downstream 592439 3977332 ~ 3990108 (-)
LOC110529264 LOC106571015 coding downstream 623197 3879833 ~ 3959350 (-)
LOC118965483 LOC100692480 coding downstream 759230 3713777 ~ 3823317 (-)
LOC110529272 tmeda coding upstream 974 4591470 ~ 4618613 (-)
LOC110529274 LOC106571028 coding upstream 28481 4618977 ~ 4621813 (-)
LOC118965591 NA coding upstream 181650 4772146 ~ 4832142 (-)
LOC110529294 LOC105029941 coding upstream 254850 4845346 ~ 4881446 (-)
LOC110529164 LOC106571040 coding upstream 596863 5187359 ~ 5204422 (-)
G667146 NA non-coding downstream 47224 4527955 ~ 4535323 (-)
G667124 NA non-coding downstream 91054 4490473 ~ 4491493 (-)
G667077 NA non-coding downstream 198597 4383562 ~ 4383950 (-)
G667043 NA non-coding downstream 331761 4249794 ~ 4250786 (-)
G667202 NA non-coding upstream 67430 4657926 ~ 4658238 (-)
G667207 NA non-coding upstream 74588 4665084 ~ 4665444 (-)
G667221 LOC106571033 non-coding upstream 96769 4687265 ~ 4704845 (-)
G667240 NA non-coding upstream 129738 4720234 ~ 4757404 (-)
G667122 NA other downstream 92327 4488806 ~ 4490220 (-)
G665927 NA other downstream 912400 3668232 ~ 3670147 (-)
G665797 NA other downstream 1060924 3520790 ~ 3521623 (-)
G665718 NA other downstream 1164259 3417113 ~ 3418288 (-)
G665655 NA other downstream 1241587 3340056 ~ 3340960 (-)
znf395b LOC106571047 other upstream 958307 5535756 ~ 5551550 (-)
G668192 NA other upstream 1616062 6206558 ~ 6284021 (-)
G668238 NA other upstream 1689700 6280196 ~ 6281640 (-)
wdr21 dcaf4 other upstream 2196036 6786377 ~ 6801903 (-)
G669087 NA other upstream 2399354 6989850 ~ 6991612 (-)

Expression


Co-expression Network