LOC110529266 (LOC106571016)


Basic Information

Item Value
gene id LOC110529266
gene name LOC106571016
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 3977332 ~ 3990108 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036984585.1
TCTACTTCAACCGTTAGAGGGCACTGTGAATTTTCCCACCAGCTCAGTTCTGACACATTTCCATGCTTGTTAACATCAGCAGGAAGTTATCGTAAACATGGCGGACTGTGGAGCAGCAGATGGACCTGTGAAGAAAGATGACATCGTACGCGCTAAAAATGAAGGGAAGGAGTTGACCAAAGAGGAGAAGCAACGGctgaggaaagagaagaaacaccAGAAGAAACAGAAGGATGAGAAGCGCCCGTCAGAAAGAGCGAAGGAAAAGAAGCCTGTCGCTCCATCACAACCTGTGGCAACACAACCCCCAACACAGAAAGctCCCACAGTGTTACCTGCCTCTGCACCAATACCTGTGCCTGCCTCAGGAgctccctcccactcctctcctgcCCCCTCCCCAGCAGACAAGCCAGCCAAAAGCAGAGCTGAGCAgaaggcagagaggagagcaagGCAGGACGCTGATAGAGCCTCTAAGCAACAGAGTTGCTTCTCCAGCAGCAAGACCAAGGCCCCTCCAAGTGAACTAAACCCAGTGGTGAAGAGACTTCCGGAACATGTCCAAGTGGACGACCCTGCAGTGGTGAAGAGACTGGCCAAGAAGTTGGAAAGACAACAGatccCCCTACGATCTGACTATGGCTACAAAGTCAGCCTGTTCTCTCACCTGCACCAGTACAGCCGCAAAGCCCCCCTCACCCAGCAACTCAGCATTCCCTCTACAGTGATCCACCCCTCCATCGTGCGGTTGGGTCTGCAGTACTCCCAGGGTATCGTGGTGGGATCCAATGCTCGCTCTGTAGCCCTGCTCCACGCCTTCAAACAGGTGATCAGGGACTATACTACTCCTCCTAATGAGGAGCTGGCCAGAGACCTGGTCAACAAGCTCAAGCCCTATATCAGTTTTCTCAATCAATGTCGCCCCCTGTCGGCGAGCATGGGCAACGCAATCAAGTATATCAAGAAAGAAATCTCCAATATTCCCAGTCAGTTCAAAGAAGAGGAAgCAAAGACCAAACTGCAGAAGTGTATAGACTGTTACATAAACGAAAACGTAGTTCTGGCTGCCAAGGCCATCTCTAAATACGCCATAAAGAAGATCAGTGACGGAGACGTCATTCTAGTTTATGGATGCTCGTCCCTGGTGAACCACATCCTTTGCGAGGCATATGATAAGAGCAGGAAGTTCCGTGTGATCGTTGTGGACAGCCGGCCTCGTCTGGAGGGAAGGGAGGCTCTGAGACGTCTCGTACAGCGAGGCATCAGCTGCACCTACGTCCTCATCTCTGCCCTCTCGTACATACTACCTGAGGTATCGAAGGTGTTCCTGGGTGCCCATGCTCTGCTGGCTAATGGCTACGTGATGTCTCGTGTGGGCACATCTCAGATAGCTCTGGTGGCTAGGACCTTCAACGTGCCGGTTCTGGTCTGCTGTGAGACATACAAGTTCTGCGAGAGGGTGCAGACTGACTCCTTCGTCTCAAACGAGCTTGACGACCCCGATGACCTGATGGTGACCCGGAAGGGGAAGACCCAGCTGGAGAACTGGCATGATGTCAGCTCCCTGGGGCTGTTGAATCTGGTCTACGACGTCACGCCACCTGATTTTGTGGACCTGGTCATCACAGACCTGGGCATGATCCCCTGTACCTCCGTTCCTGTTGTACTCCGGGTCAAAAACTTGGAACAGTAGAGggggggggagtaggggatgACGTGGGGGGGTCTGATGTAGACTTGATCTGACTGTGTTCTAGAACAAGTGCTTGTCTGGCAAGTTATAGGCCGtctcaaatggccccctattccctatatagtacacttcttttgaccagggcccatacgtctctggtcagaagtagtgcttTATATAGTGCATTACAAAATGCCAACCTATGTTCCAGTGTCCAGTCTAGCATCCGTCTTACAATGCACAGACCTACCTGATAAATAGCTTCAGTCTTAGTAGCGTGCCAGTGTGGATGTTGGAACGGGACTTTAGATACAAAGTCTCTCCCCTGCTCAGTCTTCCTACATGCTAGGCTACACACTCACTGGCCCAATTCGGACGACAGAAGTGCCAAACCGCGAGTCTACACTGCGCACACATTCACACTTGTGCTTTTGGCATTTCAATAAATGTACATCTGAAATGGCTTTTTAAACAAGA

Function

NR:

description
translation initiation factor eIF-2B subunit delta

GO:

id name namespace
GO:0044237 cellular metabolic process biological_process

KEGG:

id description
K03680 EIF2B4; translation initiation factor eIF-2B subunit delta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036984585.1 True 2173 mRNA 0.51 13 3977332 3990108

Neighbor

gene id symbol gene type direction distance location
LOC110529264 LOC106571015 coding downstream 17982 3879833 ~ 3959350 (-)
LOC118965483 LOC100692480 coding downstream 154015 3713777 ~ 3823317 (-)
ccm2 ccm2 coding downstream 856888 3081212 ~ 3120444 (-)
LOC110529255 rps12 coding downstream 1020057 2947015 ~ 2957275 (-)
LOC118965659 NA coding downstream 1020631 2956624 ~ 2956701 (-)
baalcb LOC106571017 coding upstream 47508 4037616 ~ 4047801 (-)
LOC110529162 ptk2b coding upstream 289897 4279536 ~ 4358156 (-)
LOC110529271 ei2bb coding upstream 592439 4582547 ~ 4590496 (-)
LOC110529272 tmeda coding upstream 601362 4591470 ~ 4618613 (-)
LOC110529274 LOC106571028 coding upstream 628869 4618977 ~ 4621813 (-)
G666913 apr3 non-coding downstream 2105 3968807 ~ 3975227 (-)
G666900 NA non-coding downstream 32468 3943872 ~ 3944864 (-)
G666890 NA non-coding downstream 48841 3924379 ~ 3928491 (-)
G666889 NA non-coding downstream 51121 3924104 ~ 3926211 (-)
G666849 NA non-coding downstream 97756 3879137 ~ 3879576 (-)
G666973 NA non-coding upstream 115757 4105865 ~ 4106256 (-)
G666979 NA non-coding upstream 131072 4121180 ~ 4123523 (-)
G666980 NA non-coding upstream 134243 4124351 ~ 4138041 (-)
G667019 NA non-coding upstream 217608 4207716 ~ 4208889 (-)
G667024 NA non-coding upstream 253641 4243749 ~ 4244710 (-)
G665927 NA other downstream 307185 3668232 ~ 3670147 (-)
G665797 NA other downstream 455709 3520790 ~ 3521623 (-)
G665718 NA other downstream 559044 3417113 ~ 3418288 (-)
G665655 NA other downstream 636372 3340056 ~ 3340960 (-)
G665603 NA other downstream 737280 3236888 ~ 3240052 (-)
G667122 NA other upstream 498698 4488806 ~ 4490220 (-)
znf395b LOC106571047 other upstream 1558695 5535756 ~ 5551550 (-)
G668192 NA other upstream 2216450 6206558 ~ 6284021 (-)
G668238 NA other upstream 2290088 6280196 ~ 6281640 (-)
wdr21 dcaf4 other upstream 2796424 6786377 ~ 6801903 (-)

Expression


Co-expression Network