G666913 (apr3)


Basic Information

Item Value
gene id G666913
gene name apr3
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 3968807 ~ 3975227 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU759450
TGCAAACAATGTGTTTTGCTCGTGTCTCCCTATAATGTAATTAATTAATCGATATCTTTGTCAGTTTTCCCAAAAattaggggaggggggaggggctaaTGCAACTTTATACTGCATATTATTGCTTCTACTACTATTCATGCTTCATTGATCAAGTATAAGGTTtgatttcccagacacagattaaccGTAGTGCTGGACTAAAAACATGCTCggtggagaatctccattgaaatagATGTTTTAGTCCTGTACGAGGCTTTAGTCGATGTCCCGGGAAACTGGCCCCAAGCATCTTAgtcaacttttttatttttataaaacaCGATTTGGCACATACTGTAGACCATAAAGTGAGGTCGTGTATTGTCCCGCATCACAATCTCTTAGATTTCATGTTGATCTAGGGAAATGTCTGcaaggttgtttttttttttttttttatgtttttaaaGGCTACAACGATTGCAACATCTGTGGTGATAAAACAAAGATTTAACAACCCCATCAAAACAGATGATTGAAACTATAAAGGTCAATGATACAACTACCTCCATAGAATACGCTGACTTTCCACGCTAAAGTCAGTTTTTTTAAAATGGTCACATTTTTCCACCCCTGTCTCTTCATGTCAGCATCACTGGAAGACAAGTGTTTTCCCAAATAGAGTCCCAGGACCAGGCCTCAGACCAGGGGAGTGGGTACAACCTCAGGCAGATTTGACCTTGCGTCTCTGGGTGACCCATAGCAGGATGGAGACCAGGACTGTGGAGGCCCCTAGAATCCCGAACACCTTGATTATAGGGAACTTCCCCTCTCGGAGACACTTGTATCCATGGAAGTGGTCCACACAGCTACACTCAAAGAAGCCCGGGCCATACGCTGCACAGAGGGAGTTCTCAGGGCAGTTCAATGACAGATGTCCGGTCTGGTTGCAGATGTCCTTCTGTCCTTCACAGTGACGAGTGTCCCCTTTGACCTCCATTTTATTCCATGATGCATTGCCTCCTGGACAGGTCAGGTTGACAGGCAGAATCAGGTTATCCAACTGGATGAAGCCTTGAAACAGTGAATTGTTCAGCTGAACTATGGGGTTCAGTGAGATATCTATCATTGCAGCTGTTGATGCCTCTTGAAGGTCCTTGACATGACTTAGAGAACAGTTTGATAGGTCCAACCCGATGACGTAGTCAGCATTGCTGCTGTTTTCTTTTCGCAGCAGGCAGCAGCATCCGTCAACCAAGCCCGCAGACGCGGAACAGAACTGGTCCAGAGCGGTGCTATTCTGCACTGTTCTGTTGCAGAGATGGCATACCTGTAACTCAGTCAGTTGATAACTCCCATATAAATATAAATGAAATATCAATAAGACCACTGCTGCATTCCGCTGGCTGGATCCAGCTGTCATGTTTGAACGCGATATTCATACGATCAATACAAGATAGACATGTGACTGACTGTAAGCTACTAAAATCACAGCCGCTTCCTTAATACACTCGCATGTCTCCTTGTTTCGT

Function

NR:

description
all-trans retinoic acid-induced differentiation factor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU759450 True 1517 lncRNA 0.44 7 3968807 3975227

Neighbor

gene id symbol gene type direction distance location
LOC110529264 LOC106571015 coding downstream 9457 3879833 ~ 3959350 (-)
LOC118965483 LOC100692480 coding downstream 145490 3713777 ~ 3823317 (-)
ccm2 ccm2 coding downstream 848363 3081212 ~ 3120444 (-)
LOC110529255 rps12 coding downstream 1011532 2947015 ~ 2957275 (-)
LOC118965659 NA coding downstream 1012106 2956624 ~ 2956701 (-)
LOC110529266 LOC106571016 coding upstream 2105 3977332 ~ 3990108 (-)
baalcb LOC106571017 coding upstream 62389 4037616 ~ 4047801 (-)
LOC110529162 ptk2b coding upstream 304778 4279536 ~ 4358156 (-)
LOC110529271 ei2bb coding upstream 607320 4582547 ~ 4590496 (-)
LOC110529272 tmeda coding upstream 616243 4591470 ~ 4618613 (-)
G666900 NA non-coding downstream 23943 3943872 ~ 3944864 (-)
G666890 NA non-coding downstream 40316 3924379 ~ 3928491 (-)
G666889 NA non-coding downstream 42596 3924104 ~ 3926211 (-)
G666849 NA non-coding downstream 89231 3879137 ~ 3879576 (-)
G666847 NA non-coding downstream 90456 3877642 ~ 3878351 (-)
G666917 NA non-coding upstream 6513 3981740 ~ 3982658 (-)
G666973 NA non-coding upstream 130638 4105865 ~ 4106256 (-)
G666979 NA non-coding upstream 145953 4121180 ~ 4123523 (-)
G666980 NA non-coding upstream 149124 4124351 ~ 4138041 (-)
G667019 NA non-coding upstream 232489 4207716 ~ 4208889 (-)
G665927 NA other downstream 298660 3668232 ~ 3670147 (-)
G665797 NA other downstream 447184 3520790 ~ 3521623 (-)
G665718 NA other downstream 550519 3417113 ~ 3418288 (-)
G665655 NA other downstream 627847 3340056 ~ 3340960 (-)
G665603 NA other downstream 728755 3236888 ~ 3240052 (-)
G667122 NA other upstream 513579 4488806 ~ 4490220 (-)
znf395b LOC106571047 other upstream 1573576 5535756 ~ 5551550 (-)
G668192 NA other upstream 2231331 6206558 ~ 6284021 (-)
G668238 NA other upstream 2304969 6280196 ~ 6281640 (-)
wdr21 dcaf4 other upstream 2811305 6786377 ~ 6801903 (-)

Expression


Co-expression Network