Gene
RNA
| Item | Value |
|---|---|
| gene id | G664873 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 2297282 ~ 2298299 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU756861 | True | 724 | lncRNA | 0.44 | 2 | 2297282 | 2298299 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529239 | LOC105018054 | coding | downstream | 18845 | 2233985 ~ 2278437 (-) |
| LOC110531067 | dnmt3a | coding | downstream | 96375 | 2110060 ~ 2200907 (-) |
| LOC110529242 | LOC106591799 | coding | downstream | 200450 | 2061698 ~ 2096832 (-) |
| selenoi | LOC106571011 | coding | downstream | 275656 | 1976310 ~ 2021626 (-) |
| LOC110529244 | NA | coding | downstream | 326818 | 1968290 ~ 1975576 (-) |
| LOC110529255 | rps12 | coding | upstream | 648716 | 2947015 ~ 2957275 (-) |
| LOC118965659 | NA | coding | upstream | 658325 | 2956624 ~ 2956701 (-) |
| ccm2 | ccm2 | coding | upstream | 782913 | 3081212 ~ 3120444 (-) |
| LOC118965483 | LOC100692480 | coding | upstream | 1415478 | 3713777 ~ 3823317 (-) |
| LOC110529264 | LOC106571015 | coding | upstream | 1581534 | 3879833 ~ 3959350 (-) |
| G664872 | NA | non-coding | downstream | 15444 | 2281458 ~ 2281838 (-) |
| G664871 | NA | non-coding | downstream | 17641 | 2278974 ~ 2279641 (-) |
| G664869 | NA | non-coding | downstream | 26543 | 2270082 ~ 2270739 (-) |
| G664868 | NA | non-coding | downstream | 45243 | 2250441 ~ 2252039 (-) |
| G664864 | NA | non-coding | downstream | 54462 | 2242128 ~ 2242820 (-) |
| G664874 | NA | non-coding | upstream | 1178 | 2299477 ~ 2312627 (-) |
| G664876 | NA | non-coding | upstream | 15746 | 2314045 ~ 2314836 (-) |
| G664914 | NA | non-coding | upstream | 124566 | 2422865 ~ 2435816 (-) |
| G664918 | NA | non-coding | upstream | 148108 | 2446407 ~ 2446632 (-) |
| G664919 | NA | non-coding | upstream | 148445 | 2446744 ~ 2446945 (-) |
| G664733 | NA | other | downstream | 302752 | 1993889 ~ 1994530 (-) |
| armc1l | LOC106571055 | other | downstream | 798711 | 1479450 ~ 1498700 (-) |
| G664089 | NA | other | downstream | 858841 | 1437760 ~ 1438441 (-) |
| G663235 | NA | other | downstream | 1867024 | 428191 ~ 430258 (-) |
| G663215 | NA | other | downstream | 1910300 | 381322 ~ 388193 (-) |
| G665603 | NA | other | upstream | 938589 | 3236888 ~ 3240052 (-) |
| G665655 | NA | other | upstream | 1041757 | 3340056 ~ 3340960 (-) |
| G665718 | NA | other | upstream | 1118814 | 3417113 ~ 3418288 (-) |
| G665797 | NA | other | upstream | 1222491 | 3520790 ~ 3521623 (-) |
| G665927 | NA | other | upstream | 1369933 | 3668232 ~ 3670147 (-) |
