G664874


Basic Information

Item Value
gene id G664874
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 2299477 ~ 2312627 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU756864
gagagagagaatagagaggagagagaatagagaggagagagagagaatagagaggagagagagagaatagagaggagagagagagaatagagaagagagagagagaatagagaggagagagagagaatagagaggagagagagaatagagaggagagagagaatagagaggagagagagaatagagaggagagagagaatagagaggagagagagaatagagaggagagagagactagagaggagagaatagagaggagag
>TU756862
gaatagagaggagagagagaatagagagagagagagagaatagagagagagaggagagagagaatagaggagagagagaatagaggagagagagaatagaggagagagagaatagagaagagagagagagaatagagaagagagaaagagagaatagagaagagagagagagaatagagaggagaatagagaagagagagagagaatagagaggagagagagaatagagaggagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaa
>TU756863
gaatagagaggagagagagaatagagagagagagagagaatagagagagagaggagagagagaatagaggagagagagaatagagaagagagagaatagagaagagagagagagaatagagaggagaaagagataatagagaggagagagagaagagagagagagagaatagaggagagagagaatagaggagagagagaatagagaagagagagagagaatagagaagagagaaagagagaatagagaagagagagagagaatagagaggagaatagagaagagagagagagaatagagaggagagagagaatagagaggagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaatagagaagagagagaatagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU756864 False 261 lncRNA 0.45 3 2299477 2312627
TU756862 False 331 lncRNA 0.40 4 2302890 2309376
TU756863 True 420 lncRNA 0.40 3 2302890 2309376

Neighbor

gene id symbol gene type direction distance location
LOC110529239 LOC105018054 coding downstream 21040 2233985 ~ 2278437 (-)
LOC110531067 dnmt3a coding downstream 98570 2110060 ~ 2200907 (-)
LOC110529242 LOC106591799 coding downstream 202645 2061698 ~ 2096832 (-)
selenoi LOC106571011 coding downstream 277851 1976310 ~ 2021626 (-)
LOC110529244 NA coding downstream 329013 1968290 ~ 1975576 (-)
LOC110529255 rps12 coding upstream 634388 2947015 ~ 2957275 (-)
LOC118965659 NA coding upstream 643997 2956624 ~ 2956701 (-)
ccm2 ccm2 coding upstream 768585 3081212 ~ 3120444 (-)
LOC118965483 LOC100692480 coding upstream 1401150 3713777 ~ 3823317 (-)
LOC110529264 LOC106571015 coding upstream 1567206 3879833 ~ 3959350 (-)
G664873 NA non-coding downstream 1178 2297282 ~ 2298299 (-)
G664872 NA non-coding downstream 17639 2281458 ~ 2281838 (-)
G664871 NA non-coding downstream 19836 2278974 ~ 2279641 (-)
G664869 NA non-coding downstream 28738 2270082 ~ 2270739 (-)
G664868 NA non-coding downstream 47438 2250441 ~ 2252039 (-)
G664876 NA non-coding upstream 1418 2314045 ~ 2314836 (-)
G664914 NA non-coding upstream 110238 2422865 ~ 2435816 (-)
G664918 NA non-coding upstream 133780 2446407 ~ 2446632 (-)
G664919 NA non-coding upstream 134117 2446744 ~ 2446945 (-)
G664922 NA non-coding upstream 136047 2448674 ~ 2448883 (-)
G664733 NA other downstream 304947 1993889 ~ 1994530 (-)
armc1l LOC106571055 other downstream 800906 1479450 ~ 1498700 (-)
G664089 NA other downstream 861036 1437760 ~ 1438441 (-)
G663235 NA other downstream 1869219 428191 ~ 430258 (-)
G663215 NA other downstream 1912495 381322 ~ 388193 (-)
G665603 NA other upstream 924261 3236888 ~ 3240052 (-)
G665655 NA other upstream 1027429 3340056 ~ 3340960 (-)
G665718 NA other upstream 1104486 3417113 ~ 3418288 (-)
G665797 NA other upstream 1208163 3520790 ~ 3521623 (-)
G665927 NA other upstream 1355605 3668232 ~ 3670147 (-)

Expression


Co-expression Network