Gene
RNA
| Item | Value |
|---|---|
| gene id | G666795 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 3703950 ~ 3704698 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| RNA-directed DNA polymerase from mobile element jockey |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU759294 | True | 514 | lncRNA | 0.39 | 2 | 3703950 | 3704698 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccm2 | ccm2 | coding | downstream | 583506 | 3081212 ~ 3120444 (-) |
| LOC110529255 | rps12 | coding | downstream | 746675 | 2947015 ~ 2957275 (-) |
| LOC118965659 | NA | coding | downstream | 747249 | 2956624 ~ 2956701 (-) |
| LOC110529239 | LOC105018054 | coding | downstream | 1425513 | 2233985 ~ 2278437 (-) |
| LOC110531067 | dnmt3a | coding | downstream | 1503043 | 2110060 ~ 2200907 (-) |
| LOC118965483 | LOC100692480 | coding | upstream | 9079 | 3713777 ~ 3823317 (-) |
| LOC110529264 | LOC106571015 | coding | upstream | 175135 | 3879833 ~ 3959350 (-) |
| LOC110529266 | LOC106571016 | coding | upstream | 272634 | 3977332 ~ 3990108 (-) |
| baalcb | LOC106571017 | coding | upstream | 332918 | 4037616 ~ 4047801 (-) |
| LOC110529162 | ptk2b | coding | upstream | 575307 | 4279536 ~ 4358156 (-) |
| G665924 | NA | non-coding | downstream | 41420 | 3662210 ~ 3662530 (-) |
| G665923 | NA | non-coding | downstream | 42280 | 3660852 ~ 3661670 (-) |
| G665913 | NA | non-coding | downstream | 65027 | 3638463 ~ 3638923 (-) |
| G665912 | NA | non-coding | downstream | 65638 | 3638043 ~ 3638312 (-) |
| G665907 | NA | non-coding | downstream | 70324 | 3633020 ~ 3633626 (-) |
| G666799 | NA | non-coding | upstream | 2044 | 3706742 ~ 3708871 (-) |
| G666801 | NA | non-coding | upstream | 4638 | 3709336 ~ 3709693 (-) |
| G666800 | NA | non-coding | upstream | 5316 | 3710014 ~ 3713169 (-) |
| G666808 | NA | non-coding | upstream | 24336 | 3729034 ~ 3731705 (-) |
| G666811 | NA | non-coding | upstream | 37167 | 3741865 ~ 3742251 (-) |
| G665927 | NA | other | downstream | 33803 | 3668232 ~ 3670147 (-) |
| G665797 | NA | other | downstream | 182327 | 3520790 ~ 3521623 (-) |
| G665718 | NA | other | downstream | 285662 | 3417113 ~ 3418288 (-) |
| G665655 | NA | other | downstream | 362990 | 3340056 ~ 3340960 (-) |
| G665603 | NA | other | downstream | 463898 | 3236888 ~ 3240052 (-) |
| G667122 | NA | other | upstream | 784108 | 4488806 ~ 4490220 (-) |
| znf395b | LOC106571047 | other | upstream | 1844105 | 5535756 ~ 5551550 (-) |
| G668192 | NA | other | upstream | 2501860 | 6206558 ~ 6284021 (-) |
| G668238 | NA | other | upstream | 2575498 | 6280196 ~ 6281640 (-) |
| wdr21 | dcaf4 | other | upstream | 3081834 | 6786377 ~ 6801903 (-) |
