XLOC_025970 (CR933791.2)


Basic Information

Item Value
gene id XLOC_025970
gene name CR933791.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 2200895 ~ 2209415 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050850
CCGCCATTAACGTTACCTGCGTGAATGTTCCTGTAATCAACAACAAATCTGAGTTATGTCTTCATCAGGTGTAACCACGGCAGATCCAAAAGatcctGGTGATGTtcagacaagaaaaaaaagtggAAGTTTTGAATTTCAGCCTCCCAGTATGTCCTTGAGACGAATGGTTCTGGTGGGGAGGACAGGAGCAGGTAAAAGCTCTTCTGGAAACACAATCCTGGGCAGAAAAGCCTTTAGAGCCGCGAAAAGTGCTTCATCTGTGACCAAAGAGTGCTGGAAGGAGACCGGAGAAGTGGACAAGCATCAGCTGGTGCTGGTAGATTGTCCAGGCATCTTTGACACCACTGTATCAGAGGCTGAAACCATACGAGAGATGAGTAAATGCATTAATATGACGGCTCCTGGACCTCACGCCATCATCCTGGTCATTAAACTGGGTCCATTCACTGAAGAAGAGAAACTCTCAGTGGAGAAAATCAGAGCGGTGTTTGGAGAAGCAGCAGATAAACACACTATCATCCTCTTCACACATGGAGATGAACTGACTGAGGACATTGAAATAACACTTAAAGAAGCTCGACGTGATTTAAAAGAGCTTGTAGAGTCATGTGGAGGACGATATCATGTGTTCGACAACACTAAAGTTCACAATCGCAAACAGGTTTTAGAGTTTCTGGATAAGGTTGATGAGATGCTGCGCATGAATGAGGATAAATATTACACCAGTGACATGTTTCAGCATGTGGAGAAAATGCTGAAGGACAAAGAAGAAGAGTTCAGAAAGCTGTATGATCAGAAGATATTAGAGTTAACAGACAGATTTCATGAGGAGAAGACAGAACTAGAGGAGACGATCAGACAGATGAAAGAATCTGGCCAAGAAAAAGAGCAGAAAATTAAAGAGTTAAATGAGTTAGTGAAAAAAAAGGACAGGCAGTTTAAAGAGTTTAAGCGCTTTTATAAGCAGAAATGCAGGAATGTGAGACAGGAGGTGGAAGAGACtcaagtggatgaaaacatccgaGAAATCAGCAAAAAACTACAAAAGCTCCGTGTCTGAGGTGTTGTATAGTTGATTCTAAATACTAAGAAGATATTTTCTTGTAATCTGTTgcagtttaaaaataattattttttcaaattcAAAAAGAAAATATGTGTATATGAACTGATGTGTAACTGAAGGCCTAAATACTGATGACATTAACACAGATTATATGAAATCAGCTAAATGTAAATCTACTATAGTGGGGAGAATAGCTTGTTGTATGGTACTTTCTAGTACATGTGTTCAAAGCTACAAGACTGTGAGGGACCGAGCCAGCACGTACAGTAAGAGGCATACAAAgaagattttcaaaaataattatttttaataaagtcaaaaaggtttacaaaaagttcaaaaataaattaattaaataattaaatcaattgaaagaacaataaactaaacaaggaaaacaaactgagttcaaaccaaacaaatcatgtctaaaccaaaaacagaactccATTAAATGACAAGACAGACCACATTTATAGCACAGGGACTAGTCCACATTAAACAAGAAGGGGGagacaaaaacatacaatttacaaatacaataaactaagccaaacatctaaatacaaatctaaatataagttaaataaattataaataaaggcaaaactaaatataaatctgaataaacaaacattgtAAATCATTATTGAACCTAAACTAAACATGAGCTCTCCCTCCAAGCCATTAAGCCAATGGTATCGGCAGGCAGAACCAAAAGACGGCCTCTTGCGGCACGTCGGACCTTTACTTGGGCGGACCACACCCGGAAACTCTGTTCCTCGTCGGCACTGCAGCacggtaacttaaactcaaaagaaaactaaattaacaaaacatacagtacagataactgattttgtgtgcacccaaaatagtaataa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000052876

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050850 True 1953 mRNA 0.38 3 2200895 2209415

Neighbor

gene id symbol gene type direction distance location
XLOC_025969 NA coding downstream 69065 2127644 ~ 2131830 (-)
XLOC_025968 BX005442.1 coding downstream 87412 2113367 ~ 2113483 (-)
XLOC_025967 BX005442.2 coding downstream 90002 2105598 ~ 2110893 (-)
XLOC_025966 si:dkey-88j15.4 coding downstream 109866 2083860 ~ 2091029 (-)
XLOC_025965 BX005442.4 coding downstream 128265 2070039 ~ 2072630 (-)
XLOC_025971 NA coding upstream 116789 2326204 ~ 2335791 (-)
XLOC_025972 NA coding upstream 264015 2473430 ~ 3163735 (-)
XLOC_025973 NA coding upstream 265590 2475005 ~ 3164993 (-)
XLOC_025974 NA coding upstream 359065 2568480 ~ 3311200 (-)
XLOC_025975 si:dkey-217f16.5 coding upstream 362852 2572267 ~ 2593859 (-)
XLOC_025964 NA non-coding downstream 167790 2013324 ~ 2033105 (-)
XLOC_025960 BX465228.1 non-coding downstream 312691 1880882 ~ 1888204 (-)
XLOC_025959 BX465228.2 non-coding downstream 324924 1862871 ~ 1875971 (-)
XLOC_025976 NA non-coding upstream 389296 2598711 ~ 3372259 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000255_00197338_00204060 NA coding CI01000255 null 196064 ~ 204529 (+)