G667434



Basic Information


Item Value
gene id G667434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 5155071 ~ 5155693 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU760123
tgtgtgtggaggtcaatgagagtgtcgaatttggtccgcaacattttttttaaatgacttatTTGCTACATGATCGAATAGATGTTTCGTAATGTTTACGTCGTTACGAGTGTACTTATATAAAAGTTGGGACACGTGACATCGGAGTTGTACCCATTGTTCAAATGTTTATCTgctctctcattggctagaatggtcccacctgatctagCCTCCAGCCGACTACCTTCCATGTTTGAAGACATTCTTTGATTGTTAATGGCCACTACGGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTATCATCACATAACGGATCTGGCCACTACAGTAGTATCACATAACGGATCTGGCCACTACAGTATCATCACATAACAGATCATTTATGGTGAAGTGTAAAGTGATTAGGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU760123 True 568 lncRNA 0.42 2 5155071 5155693

Neighbor


gene id symbol gene type direction distance location
LOC110529294 LOC105029941 coding downstream 273625 4845346 ~ 4881446 (-)
LOC118965591 NA coding downstream 322929 4772146 ~ 4832142 (-)
LOC110529274 LOC106571028 coding downstream 533258 4618977 ~ 4621813 (-)
LOC110529272 tmeda coding downstream 536458 4591470 ~ 4618613 (-)
LOC110529271 ei2bb coding downstream 564575 4582547 ~ 4590496 (-)
LOC110529164 LOC106571040 coding upstream 31666 5187359 ~ 5204422 (-)
LOC110529166 LOC106571043 coding upstream 188819 5344512 ~ 5362682 (-)
LOC110529167 LOC106571044 coding upstream 208526 5364219 ~ 5450340 (-)
znf395b LOC106571047 coding upstream 380063 5535756 ~ 5551550 (-)
si:dkey-229d11.5 NA coding upstream 428152 5583845 ~ 5586635 (-)
G667416 NA non-coding downstream 19440 5134135 ~ 5135631 (-)
G667403 NA non-coding downstream 55058 5099663 ~ 5100013 (-)
G667380 NA non-coding downstream 72591 5081875 ~ 5082480 (-)
G667348 NA non-coding downstream 139399 5009386 ~ 5015672 (-)
G667345 NA non-coding downstream 142748 4996163 ~ 5012323 (-)
G667454 NA non-coding upstream 69636 5225329 ~ 5225732 (-)
G667481 NA non-coding upstream 133438 5289131 ~ 5289350 (-)
G667506 NA non-coding upstream 229137 5384830 ~ 5385178 (-)
G667507 NA non-coding upstream 233357 5389050 ~ 5389391 (-)
G667509 NA non-coding upstream 245181 5400874 ~ 5406097 (-)
G667122 NA other downstream 664851 4488806 ~ 4490220 (-)
G665927 NA other downstream 1484924 3668232 ~ 3670147 (-)
G665797 NA other downstream 1633448 3520790 ~ 3521623 (-)
G665718 NA other downstream 1736783 3417113 ~ 3418288 (-)
G665655 NA other downstream 1814111 3340056 ~ 3340960 (-)
G668192 NA other upstream 1050865 6206558 ~ 6284021 (-)
G668238 NA other upstream 1124503 6280196 ~ 6281640 (-)
wdr21 dcaf4 other upstream 1630839 6786377 ~ 6801903 (-)
G669087 NA other upstream 1834157 6989850 ~ 6991612 (-)

Expression



Co-expression Network