G670088


Basic Information

Item Value
gene id G670088
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 8317632 ~ 8318447 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU763331
caggtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaatcaacaggtgtagactaacagtgaaatgctttgtaaacaacaggtgtagactaacagtgaaatgctt
>TU763330
gtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaatcaacaggtgtagactaacagtgaaatgcttcttaaacaacaggtgtagactaacagtgaaatgcttcttaatcaacaggtgtagactaacagtgaaatgcttgttaaacaacaggtgtagactaacagtgaaatgcttc

Function

NR:

description
PREDICTED: uncharacterized protein LOC108268585

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU763331 False 207 lncRNA 0.37 2 8317632 8318054
TU763330 True 241 lncRNA 0.37 2 8317847 8318447

Neighbor

gene id symbol gene type direction distance location
LOC110529177 LOC106571102 coding downstream 62220 8010070 ~ 8255412 (-)
LOC118965603 NA coding downstream 370606 7946285 ~ 7947278 (-)
LOC110529310 LOC106571100 coding downstream 372751 7943145 ~ 7944881 (-)
LOC118965489 NA coding downstream 514910 7791386 ~ 7802722 (-)
LOC110529176 LOC106571097 coding downstream 627923 7670795 ~ 7689709 (-)
LOC110529315 LOC106571103 coding upstream 23921 8342368 ~ 8343912 (-)
LOC110529314 7b2 coding upstream 25575 8344022 ~ 8357681 (-)
LOC110529317 LOC105024319 coding upstream 45017 8363464 ~ 8376260 (-)
LOC118965604 NA coding upstream 246943 8565390 ~ 8567720 (-)
LOC110529319 LOC106571106 coding upstream 366913 8685360 ~ 8731870 (-)
G670072 NA non-coding downstream 30664 8281643 ~ 8286968 (-)
G670063 NA non-coding downstream 50022 8267396 ~ 8267610 (-)
G669903 NA non-coding downstream 263438 8053771 ~ 8054194 (-)
G669856 NA non-coding downstream 375419 7941871 ~ 7942213 (-)
G670105 NA non-coding upstream 39604 8358051 ~ 8358269 (-)
G670108 NA non-coding upstream 42381 8360828 ~ 8361085 (-)
G670109 NA non-coding upstream 43116 8361563 ~ 8361763 (-)
G670124 NA non-coding upstream 75644 8394091 ~ 8394548 (-)
G670115 NA non-coding upstream 102890 8421337 ~ 8438087 (-)
G669918 NA other downstream 206674 8107871 ~ 8110958 (-)
G669281 NA other downstream 899397 7416025 ~ 7418235 (-)
LOC110529302 LOC106571090 other downstream 903396 7400907 ~ 7423688 (-)
G669229 NA other downstream 982918 7325550 ~ 7334714 (-)
G669278 NA other downstream 997429 7317304 ~ 7320203 (-)
G670097 NA other upstream 22543 8340990 ~ 8342120 (-)
G670549 NA other upstream 258604 8577051 ~ 8577780 (-)
G670733 LOC107575789 other upstream 637646 8949694 ~ 8961731 (-)
G670905 NA other upstream 945403 9263850 ~ 9265093 (-)
G671122 NA other upstream 1027937 9346384 ~ 9347879 (-)

Expression


Co-expression Network