Gene
RNA
| Item | Value |
|---|---|
| gene id | G689820 |
| gene name | LOC106571476 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 25681744 ~ 25682799 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: G patch domain-containing protein 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU785417 | True | 415 | lncRNA | 0.63 | 5 | 25681744 | 25682799 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529682 | LOC106571470 | coding | downstream | 178309 | 25497573 ~ 25503435 (-) |
| LOC110529680 | disp1 | coding | downstream | 191470 | 25416277 ~ 25490274 (-) |
| LOC110529676 | LOC106571466 | coding | downstream | 355446 | 25323627 ~ 25326298 (-) |
| LOC110529677 | brox | coding | downstream | 360932 | 25310439 ~ 25320812 (-) |
| LOC110529678 | LOC106571467 | coding | downstream | 371961 | 25307431 ~ 25309783 (-) |
| LOC110529692 | LOC106607895 | coding | upstream | 61225 | 25744024 ~ 25758350 (-) |
| LOC110529693 | LOC106571480 | coding | upstream | 76078 | 25758877 ~ 25775028 (-) |
| LOC110529218 | NA | coding | upstream | 114101 | 25796900 ~ 25800394 (-) |
| LOC110529694 | LOC106571481 | coding | upstream | 118521 | 25801320 ~ 25805570 (-) |
| LOC110529696 | LOC106571482 | coding | upstream | 171781 | 25854580 ~ 25873677 (-) |
| G689808 | NA | non-coding | downstream | 19037 | 25662488 ~ 25662707 (-) |
| G689799 | NA | non-coding | downstream | 28377 | 25653013 ~ 25653367 (-) |
| G689780 | NA | non-coding | downstream | 29764 | 25648138 ~ 25651980 (-) |
| G689747 | NA | non-coding | downstream | 94458 | 25586381 ~ 25587286 (-) |
| G689742 | NA | non-coding | downstream | 139148 | 25542299 ~ 25542596 (-) |
| G689822 | NA | non-coding | upstream | 1723 | 25684522 ~ 25684796 (-) |
| G689823 | NA | non-coding | upstream | 4683 | 25687482 ~ 25687687 (-) |
| G689845 | NA | non-coding | upstream | 30760 | 25713559 ~ 25713797 (-) |
| G689846 | NA | non-coding | upstream | 31236 | 25714035 ~ 25714529 (-) |
| G689856 | NA | non-coding | upstream | 35786 | 25718585 ~ 25718789 (-) |
| G689810 | LOC106571475 | other | downstream | 17079 | 25664165 ~ 25664665 (-) |
| G689723 | rad51 | other | downstream | 160456 | 25517566 ~ 25521288 (-) |
| G689685 | NA | other | downstream | 270612 | 25410823 ~ 25411132 (-) |
| G689656 | tlr5m | other | downstream | 274397 | 25376122 ~ 25407347 (-) |
| LOC110529665 | LOC106571552 | other | downstream | 683909 | 24992535 ~ 25010299 (-) |
| G690033 | NA | other | upstream | 282380 | 25965179 ~ 25965493 (-) |
| G690073 | NA | other | upstream | 307879 | 25990678 ~ 25991143 (-) |
| cenpw | LOC106571497 | other | upstream | 746316 | 26428702 ~ 26430888 (-) |
| G691447 | LOC106571509 | other | upstream | 1181411 | 26864210 ~ 26868078 (-) |
