Fish Transcriptome and Expression Database

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model fish

XLOC_026527 (BX649502.12)

Basic Information

Item	Value
gene id	XLOC_026527
gene name	BX649502.12
gene type	coding
species	zebrafish (Danio rerio)
category of species	model fish

Chromosome Information

Item	Value
chromosome id	NC_007114.7
NCBI id	CM002887.2
chromosome length	62628489
location	34015518 ~ 34015533 (-)
genome version	GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051699
ACTATACGGGGTGGGG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id

ENSDARG00000109903

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TCONS_00051699	True	16	mRNA	0.63	1	34015518	34015533

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
XLOC_026526	ighj1-1	coding	downstream	14555	34000919 ~ 34000963 (-)
XLOC_026525	ighj1-2	coding	downstream	15109	34000364 ~ 34000409 (-)
XLOC_026524	ighz	coding	downstream	17755	33994684 ~ 33997763 (-)
XLOC_026523	BX510335.2	coding	downstream	35267	33980241 ~ 33980251 (-)
XLOC_026522	BX510335.4	coding	downstream	35939	33979568 ~ 33979579 (-)
XLOC_026528	si:dkey-204f11.51	coding	upstream	2305	34017838 ~ 34017876 (-)
XLOC_026529	BX649502.7	coding	upstream	7632	34023165 ~ 34023613 (-)
XLOC_026530	ighv1-3	coding	upstream	12924	34028457 ~ 34028894 (-)
XLOC_026531	ighv2-3	coding	upstream	14927	34030460 ~ 34030935 (-)
XLOC_026532	ighv13-2	coding	upstream	16044	34031577 ~ 34032019 (-)
XLOC_026513	BX510335.1	non-coding	downstream	66730	33948669 ~ 33948788 (-)
XLOC_026511	NA	non-coding	downstream	96323	33918566 ~ 33919195 (-)
XLOC_026509	CU695077.1	non-coding	downstream	324764	33681518 ~ 33690754 (-)
XLOC_026505	CR396582.3	non-coding	downstream	591190	33424192 ~ 33424328 (-)
XLOC_026500	CABZ01012959.1	non-coding	downstream	670271	33344076 ~ 33345247 (-)
XLOC_026534	BX649502.8	non-coding	upstream	19659	34035192 ~ 34035631 (-)
XLOC_026538	BX649502.6	non-coding	upstream	31646	34047179 ~ 34047616 (-)
XLOC_026539	BX649502.4	non-coding	upstream	32672	34048205 ~ 34048653 (-)
XLOC_026544	BX649502.10	non-coding	upstream	43146	34058679 ~ 34058717 (-)

Expression

Co-expression Network