XLOC_026531 (ighv2-3)


Basic Information

Item Value
gene id XLOC_026531
gene name ighv2-3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34030460 ~ 34030935 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00051705
ATGTTGGAAAAGGAGTCAAAAAGCATTTTGTTTATCATCTTTATATTGATTCTTTTACAGCATGGTATCAGTGGTGATGAAATTCGATTAGATCAGTCACCTGCTGTGACAAAGAGACCTGGAGAAACAGTGAAGATCTCCTGTAAAATATCTGGGTTTACAATGACTGAGCACTACATGCATTGGATACGGCAGAAGCCTGGAGAAGCTCTGGAATGGATTGGGAAAATTAATACTGGCAGCAGTTCTTGCTCTGATTATCTTGTCTATGCAGACTACATAAAAAATACCACGATGAGTGAGGATGTTTCTCAAAGTACACAATATCTTGAAGCCAAGAGTCTGAGAGAAGAGCACACTGCTATTTATTACTGTGCTCGAGAACCAGGG

Function

symbol description
ighv2-3 Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096376

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00051705 True 390 mRNA 0.40 2 34030460 34030935

Neighbor

gene id symbol gene type direction distance location
XLOC_026530 ighv1-3 coding downstream 1566 34028457 ~ 34028894 (-)
XLOC_026529 BX649502.7 coding downstream 6847 34023165 ~ 34023613 (-)
XLOC_026528 si:dkey-204f11.51 coding downstream 12584 34017838 ~ 34017876 (-)
XLOC_026527 BX649502.12 coding downstream 14927 34015518 ~ 34015533 (-)
XLOC_026526 ighj1-1 coding downstream 29497 34000919 ~ 34000963 (-)
XLOC_026532 ighv13-2 coding upstream 642 34031577 ~ 34032019 (-)
XLOC_026533 ighv11-2 coding upstream 3113 34034048 ~ 34034498 (-)
XLOC_026534 BX649502.8 coding upstream 4257 34035192 ~ 34035631 (-)
XLOC_026535 ighv9-4 coding upstream 5684 34036619 ~ 34042028 (-)
XLOC_026536 ighv9-3 coding upstream 7818 34038753 ~ 34039242 (-)
XLOC_026513 BX510335.1 non-coding downstream 81672 33948669 ~ 33948788 (-)
XLOC_026511 NA non-coding downstream 111265 33918566 ~ 33919195 (-)
XLOC_026509 CU695077.1 non-coding downstream 339706 33681518 ~ 33690754 (-)
XLOC_026505 CR396582.3 non-coding downstream 606132 33424192 ~ 33424328 (-)
XLOC_026538 BX649502.6 non-coding upstream 16244 34047179 ~ 34047616 (-)
XLOC_026539 BX649502.4 non-coding upstream 17270 34048205 ~ 34048653 (-)
XLOC_026544 BX649502.10 non-coding upstream 27744 34058679 ~ 34058717 (-)
XLOC_026547 BX649502.5 non-coding upstream 33020 34063955 ~ 34064936 (-)

Expression


Co-expression Network