LOC110531252


Basic Information

Item Value
gene id LOC110531252
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 68257720 ~ 68258742 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110531252
GCAATGTATTCGTTCGATGGTGTACTGGTGTTCGGCTTGCTGTTCATCTGCACGTGTGCCTCGCATGAAGGGCTGGCTGAAAAGAGAGGGGTCTGGGGGAGTGTTCTATAATGCATCTGTGATTGGGACCAGACTTCACCTGACAGTGGCTCTATCCTGTGTGACCATGGCGTTCTATGTCTTTCTAAAGGGACCAACTAGGGGACTGGACTGTCTAGTCGGCACCTCATGgacactagcctggtcccaggtttCTTTGACAATGACAGCAATTGAATTTTCAAGACAGTAAAAACACAAATAGATCTGTGACCAGGCTGCATGAACACTGGCTATGAGCTCGGAACCAAATGAACGATGGGGATAAAAACTTTCCAAAAGTGGGCTTCTCTCTGTCAACATGCCACACTTTCTGAACTGAGATGTTATTTGAGTTAGAGAGGTGATGAAAAAAGGTCaagacactgacagacacagagatCAACAACATGAGAGAGGGCCCCTCTGTGTGCAGTCAGTGGTGAAAACAAATTGGGTGATGTATCTCTTTCTGTGTATTCAAAAGGGGACTTTGGGAATTTAACTGTGAATCTCAGGAGTTTGGACCAAGGTACCTCGACAGGACCAATGTATAAAATTTTCAtttgacatttattttttaaagtgtgATTTTCTATTACGTGGATGAAGGTGGAATAGAGGGTGGAAATGGAAAATAAAGTTGATAAAATATATTGCCGTAAATTAATAAAG

Function

NR:

description
PREDICTED: protein kish-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110531252 True 753 mRNA 0.43 2 68257720 68258742

Neighbor

gene id symbol gene type direction distance location
fance fance coding upstream 38760 68213202 ~ 68218960 (+)
LOC110533037 NA coding upstream 45394 68210179 ~ 68212326 (+)
LOC110532736 LOC106572735 coding upstream 146615 68099693 ~ 68111105 (+)
LOC118965940 LOC106572726 coding upstream 323203 67922657 ~ 67934517 (+)
LOC110533035 LOC106572734 coding upstream 346494 67905031 ~ 67911226 (+)
LOC118966196 NA coding downstream 225 68258913 ~ 68259946 (+)
LOC110532744 p38b coding downstream 14659 68273401 ~ 68307667 (+)
LOC110532746 LOC106572736 coding downstream 69193 68327935 ~ 68347188 (+)
LOC110531253 LOC106572751 coding downstream 192342 68451084 ~ 68470509 (+)
LOC110532749 LOC106572763 coding downstream 305394 68564136 ~ 68582410 (+)
G834221 NA non-coding upstream 1586 68255880 ~ 68256134 (+)
G834184 NA non-coding upstream 62173 68194344 ~ 68195547 (+)
G834185 LOC106566995 non-coding upstream 65414 68191899 ~ 68192306 (+)
G834178 NA non-coding upstream 74413 68182503 ~ 68183307 (+)
G834142 NA non-coding upstream 105965 68151265 ~ 68151755 (+)
G834225 NA non-coding downstream 1324 68260066 ~ 68260406 (+)
G834211 NA non-coding downstream 5255 68263997 ~ 68264627 (+)
G834235 NA non-coding downstream 28473 68287215 ~ 68288525 (+)
G834215 LOC106572737 non-coding downstream 32075 68290817 ~ 68291844 (+)
G834099 NA other upstream 208498 68048913 ~ 68049222 (+)
G833906 LOC100194703 other upstream 636354 67620878 ~ 67621366 (+)
G833541 NA other upstream 1043836 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 1323233 66931688 ~ 66934487 (+)
G834228 NA other downstream 9295 68268037 ~ 68268408 (+)
LOC118965941 cyp2k5 other downstream 361174 68619611 ~ 68625512 (+)

Expression


Co-expression Network