G834185 (LOC106566995)


Basic Information

Item Value
gene id G834185
gene name LOC106566995
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 68191899 ~ 68192306 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948710
CGCTAGAGAGTTGTCCTCCCATCTCTTGTGTGACCGCGTGAAGTCAGAGGGAGTCTTAAGGGGCAGGGACTTGGCCAGCACTGGGAGCCTGCTGATGCCCAGCGGTCTTATCGTGAGTTTAGGACCGTCGTCTGAGGCTGCTGCTGGGTCCTTGTTCTCAGGCCCCGGTTTGGAAGGATGGCCATGGGGTACAGAGGGGTGTTTGGAAGGACGGGGTACAGATGGGTGTTTAGAGCCTGGCTTTGTGTCTGCTGTCATTCTGTTGAGACTGGAGGGGGACAGTCAATGTAGAGAGTGTAGACATATGTTTCAGGCAGTGTATCCACAGTGTTGTTTTTAAATGCAGGTTCAGCTATAGACAGCGGCCATGAATCATTAGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948710 True 381 lncRNA 0.54 2 68191899 68192306

Neighbor

gene id symbol gene type direction distance location
LOC110532736 LOC106572735 coding upstream 80794 68099693 ~ 68111105 (+)
LOC118965940 LOC106572726 coding upstream 257382 67922657 ~ 67934517 (+)
LOC110533035 LOC106572734 coding upstream 280673 67905031 ~ 67911226 (+)
LOC110533034 LOC106572723 coding upstream 419063 67768340 ~ 67772836 (+)
LOC110532731 LOC106572722 coding upstream 436784 67718177 ~ 67755296 (+)
LOC110533037 NA coding downstream 17873 68210179 ~ 68212326 (+)
fance fance coding downstream 20896 68213202 ~ 68218960 (+)
LOC110531252 NA coding downstream 65414 68257720 ~ 68258742 (+)
LOC118966196 NA coding downstream 66661 68258913 ~ 68259946 (+)
LOC110532744 p38b coding downstream 81095 68273401 ~ 68307667 (+)
G834178 NA non-coding upstream 8592 68182503 ~ 68183307 (+)
G834142 NA non-coding upstream 40144 68151265 ~ 68151755 (+)
G834159 LOC106572729 non-coding upstream 40889 68138811 ~ 68151010 (+)
G834144 NA non-coding upstream 82335 68106525 ~ 68109564 (+)
G834141 NA non-coding upstream 97115 68094442 ~ 68094784 (+)
G834184 NA non-coding downstream 2038 68194344 ~ 68195547 (+)
G834221 NA non-coding downstream 63574 68255880 ~ 68256134 (+)
G834225 NA non-coding downstream 67760 68260066 ~ 68260406 (+)
G834211 NA non-coding downstream 71691 68263997 ~ 68264627 (+)
G834099 NA other upstream 142677 68048913 ~ 68049222 (+)
G833906 LOC100194703 other upstream 570533 67620878 ~ 67621366 (+)
G833541 NA other upstream 978015 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 1257412 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 1370260 66814464 ~ 66821639 (+)
G834228 NA other downstream 75731 68268037 ~ 68268408 (+)
G834235 NA other downstream 94909 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 274253 68451084 ~ 68470509 (+)
LOC110532749 LOC106572763 other downstream 386591 68564136 ~ 68582410 (+)

Expression


Co-expression Network