G834144


Basic Information

Item Value
gene id G834144
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 68106525 ~ 68109564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948648
GATACCACAGATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGATAAACACATATATTCAGTTACCCAGATACCACAAATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATTCAGTTACACTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATATATAGTGTTACTCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGAT
>TU948647
CTGTTACCCTGATACCACAGATAAACACATCTATACTGTTACCCTGATACCACAAATAAACACATCTATACAGTTACCCTGATACCACAGATAAACACATCTATACAGTTACCCTGATACCACAGATAAACACATCTATACAGTTACCCTGATACCACAGATAAACACATCTATACAGTTACCCTGATACCACAGATAAACACATCTATACTGTTACCCCGATACCACAAATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATACTGTTACCCTGATACCACAAATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAAATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAAAAAAACACATATATACTGTTACCCTGATACCACAAAtaaatacatctatactgttacCCTGATATCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGATAAACCCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACATCTATACAGTTACCCTGATACCACAGATAACCACATATATAGTGTTACTCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGATAAACACATATATTCAGTTACCCAGATACCACAAATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATCTATTCAGTTACACTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGATAAACACATCTATACTGTTACCCTGATACCACAGATAAACACATATATAGTGTTACTCTGATACCACAGATAAACACATCTATTCAGTTACCCTGATACCACAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948648 False 327 lncRNA 0.36 2 68106525 68109564
TU948647 True 941 lncRNA 0.36 2 68108589 68109564

Neighbor

gene id symbol gene type direction distance location
LOC118965940 LOC106572726 coding upstream 172008 67922657 ~ 67934517 (+)
LOC110533035 LOC106572734 coding upstream 195299 67905031 ~ 67911226 (+)
LOC110533034 LOC106572723 coding upstream 333689 67768340 ~ 67772836 (+)
LOC110532731 LOC106572722 coding upstream 351410 67718177 ~ 67755296 (+)
tebp tebp coding upstream 480548 67622423 ~ 67625977 (+)
LOC110533037 NA coding downstream 100615 68210179 ~ 68212326 (+)
fance fance coding downstream 103638 68213202 ~ 68218960 (+)
LOC110531252 NA coding downstream 148156 68257720 ~ 68258742 (+)
LOC118966196 NA coding downstream 149403 68258913 ~ 68259946 (+)
LOC110532744 p38b coding downstream 163837 68273401 ~ 68307667 (+)
G834141 NA non-coding upstream 11741 68094442 ~ 68094784 (+)
G834131 NA non-coding upstream 20929 68085273 ~ 68085596 (+)
G834122 NA non-coding upstream 28585 68077729 ~ 68077940 (+)
G834107 NA non-coding upstream 45931 68060259 ~ 68060594 (+)
G834105 NA non-coding upstream 49182 68057116 ~ 68057343 (+)
G834159 LOC106572729 non-coding downstream 29247 68138811 ~ 68151010 (+)
G834142 NA non-coding downstream 41701 68151265 ~ 68151755 (+)
G834178 NA non-coding downstream 72939 68182503 ~ 68183307 (+)
G834185 LOC106566995 non-coding downstream 82335 68191899 ~ 68192306 (+)
G834184 NA non-coding downstream 84780 68194344 ~ 68195547 (+)
G834099 NA other upstream 57303 68048913 ~ 68049222 (+)
G833906 LOC100194703 other upstream 485159 67620878 ~ 67621366 (+)
G833541 NA other upstream 892641 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 1172038 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 1284886 66814464 ~ 66821639 (+)
G834228 NA other downstream 158473 68268037 ~ 68268408 (+)
G834235 NA other downstream 177651 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 356995 68451084 ~ 68470509 (+)
LOC110532749 LOC106572763 other downstream 469333 68564136 ~ 68582410 (+)

Expression


Co-expression Network