G834858


Basic Information

Item Value
gene id G834858
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 68692126 ~ 68692571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU949530
cttcttacatcagctgatatctcaaagtgctgtacagaaatccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtgtctaggaaaaactccctagaaaggccaaaacctaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctggctgtgccgggtggagattataacagaacatggccaagatgttaaaatgttcataaatgaccagcatggtcatataataataatcacagtagttgtcgagggtgcaacaagtcagcacctcaggagtaaatgtcagttggcttttcatagccgatcattaagagtatctctaccgctcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcacatccggtgaacaggtcagggttccatagctgcaggcagaacagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU949530 True 446 lncRNA 0.47 1 68692126 68692571

Neighbor

gene id symbol gene type direction distance location
LOC118965941 cyp2k5 coding upstream 66614 68619611 ~ 68625512 (+)
LOC110532749 LOC106572763 coding upstream 111028 68564136 ~ 68582410 (+)
LOC110531253 LOC106572751 coding upstream 225518 68451084 ~ 68470509 (+)
LOC110532746 LOC106572736 coding upstream 344938 68327935 ~ 68347188 (+)
LOC110532744 p38b coding upstream 384459 68273401 ~ 68307667 (+)
LOC110532752 NA coding downstream 15139 68707710 ~ 68710615 (+)
LOC110532753 LOC106572761 coding downstream 48161 68740732 ~ 68765014 (+)
LOC100136778 LOC100136778 coding downstream 161993 68854564 ~ 68861086 (+)
LOC110532754 LOC106572760 coding downstream 169825 68862396 ~ 68865443 (+)
LOC118966104 LOC106572753 coding downstream 197899 68890470 ~ 68894840 (+)
G834855 NA non-coding upstream 2149 68689699 ~ 68689977 (+)
G834849 NA non-coding upstream 11580 68679985 ~ 68680546 (+)
G834823 NA non-coding upstream 35289 68655177 ~ 68656837 (+)
G834819 NA non-coding upstream 42992 68648800 ~ 68649134 (+)
G834864 NA non-coding downstream 5713 68698284 ~ 68698612 (+)
G834865 LOC106456091 non-coding downstream 7306 68699877 ~ 68700156 (+)
G834872 NA non-coding downstream 19394 68711965 ~ 68712656 (+)
G834235 NA other upstream 403601 68287215 ~ 68288525 (+)
G834228 NA other upstream 423718 68268037 ~ 68268408 (+)
G835266 NA other downstream 547025 69239596 ~ 69244478 (+)
LOC110532770 LOC106572808 other downstream 568600 69261156 ~ 69267394 (+)
G835268 LOC106572807 other downstream 594705 69287276 ~ 69367788 (+)
G836274 LOC106581772 other downstream 1340421 70032992 ~ 70033227 (+)
G836374 NA other downstream 1516107 70208678 ~ 70209635 (+)

Expression


Co-expression Network